Candidozyma auris: CJI96_0000926
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Entry
CJI96_0000926 CDS
T04850
Name
(RefSeq) SKI complex subunit WD repeat protein SKI8
KO
K12601
superkiller protein 8
Organism
caur
Candidozyma auris
Pathway
caur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJI96_0000926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caur03019
]
CJI96_0000926
Messenger RNA biogenesis [BR:
caur03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
CJI96_0000926
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Lactonase
Beta-prop_RIG_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_Nup120_160
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_2nd
NBCH_WD40
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
40025348
NCBI-ProteinID:
XP_028892601
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Position
1:1984101..1985264
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AA seq
387 aa
AA seq
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MGKQYISTVTASHAHQSDISGVAMTDKYTVTVSSDGYAAFWDNKKDEVHNPSEHVVRKLI
DPIGIHHVAAYQNIPPDSTNKVVLLAFACFDGSIRFRYYVNDDLETFTELPTGSTFKANF
WTPGFYKDPKSKQDMFIATKASGSAAVYALNVKDEDGKIQIVISSLLGELHITVNNASFP
NSLGVSKGPEGLVAVGYTSGDVAVFSLHGLKALFTFYSTDLQIAENIGSSSVPRVLEFSP
GGSLLAVARDNQSAGSITLYDVEYGESVGSLTTSSHSAKTTVGGFAHEGWIMGLDFNEDG
SLLASCGFDKCIRVWNIESREREATIQVNVTDLENTEHDESIDSSVCSGVAFINRGIRAG
AGGDSNEGLCVVSFDRGVRWYREAGGI
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagcagtatattctgacagtcacggcgtcacacgcccaccagctggatattctg
ggggtggctatgacagacaaatacactgtcacggtttccagtgacggctacgcggctttc
tgggataacaagaaagacgaagtccacaatccatcggagcatgttgtgaggaaattgata
gacccgatcggcattcaccatgttgctgcataccagaatattcccccagatctgacaaac
aaggttgtcttgttggcttttgcctgtttcgatggctccatcaggtttcgctactacgtc
aacgatgaccttgaaaccttcaccgaattacccaccggatccacatttaaagctaacttc
tggacgcctggcttttacaaagacccaaagtcaaagcaggatatgttcattgccacaaaa
gctagtggcctggctgcagtgtatgctttaaatgtcaaggatgaagatggcaagatacag
atcgttatctctctgttactaggcgagcttcacatcacagtcaacaatgcttcatttcca
aactccttgggcgtgtcaaaaggacctgagggccttgtagctgtgggttacacttccggc
gatgttgctgtattcagtttgcatggtctcaaagcattgtttactttttactcgaccgac
cttcagatcgccgagaacatagggtctagctcagttcctcgtgttcttgaattctctcct
ggtggttcacttttggctgttgccagagacaaccagtctgccggtctgatcacgctttac
gatgtggagtacggcgagagtgtgggttcgttaaccacgtcgtcacattcagccaaaact
actgtcggagggtttgcacatgaggggtggataatgggtcttgatttcaatgaagacggc
ctgcttctagccagttgtggattcgacaaatgcataagggtatggaatattgaaagccgt
gaacgtgaagctaccattcaggtcaacgtcactgacttggaaaacactgaacacgacgaa
agcatagatagcagtgtttgcagtggcgttgccttcatcaatagaggaattagagctgga
gctggtggtgattccaatgagggtctctgcgtggtgagctttgaccgtggtgtgcgctgg
tacagagaggcaggagggatctga
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