Candidozyma auris: CJI96_0001262
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Entry
CJI96_0001262 CDS
T04850
Name
(RefSeq) TFIIH/NER complex subunit TFB1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
caur
Candidozyma auris
Pathway
caur03022
Basal transcription factors
caur03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CJI96_0001262
09124 Replication and repair
03420 Nucleotide excision repair
CJI96_0001262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caur03021
]
CJI96_0001262
03400 DNA repair and recombination proteins [BR:
caur03400
]
CJI96_0001262
Transcription machinery [BR:
caur03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CJI96_0001262
DNA repair and recombination proteins [BR:
caur03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CJI96_0001262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
40026373
NCBI-ProteinID:
XP_028891869
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All DBs
Position
1:2720329..2722251
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AA seq
640 aa
AA seq
DB search
MATVSGACVISKVSGLVQIREDTTPSKLMWKAIDQDKSLEIPLNALSRLQTTPDSSPKMV
LKLFYSEPPSTEVKDIKLSFNNRQTMTAVKEALQTIIARQKTVIKDTDGQSTATASPAPG
EKDATATPEGTPAPGNPLDFSSPKSLSDASLLKNHELQKKVLLDDPNLRNIFTQSVIKFK
LSPTMFWSSRIGQLRTCALQISQHRGPYNVLSTIKPVATSDNQVNVNVTRSTINEIFETY
PIIKRAFNELVPAKLSEGEFWSRFFNSKLFRRLRGDRINTQNTRGDVIIDKYLEESSEVP
DTSKKSASEKINTREKYHVNKFLDLFGNDQDNSQKLGLSPDFTMKFSDEHAEGNDGTAPG
QQSKRDNEMVILMKNMNKLSSKMVDMNAEEAKKSEDAAEEVKEHEQELDLNDLNETEDLQ
FIQLHLDTDRARVIASHKREKTPEDENVSCDELGSFLISNEFKASATGTDLSETYKSQSN
DIAKAATDITALVKYNYRTFRSLHNLRDATGATGEKLLPQDVVQDLLTYNVTIVEFLSHF
WNLFLNSGNPTQLKKIFTNLRTCQRAIEALESKISSLISENPHVKANEKLQPKLLKDLES
CVAPLKSSLHKACNEYIAAVKASQNEDSKLNSNGKRPLEA
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggccacagtatctggagcgtgtgtgatctcaaaagtctctggtcttgtccagatccgc
gaggacaccacgccgtccaagcttatgtggaaggcaatcgaccaggacaagtctcttgag
atcccactcaatgcgttatcgaggctccagactacacccgattcgtctcccaagatggtg
ctcaagctcttttattcagagccgccaagcacagaagtaaaggacatcaagctttcgttc
aataatcgacagacaatgacggcggtcaaggaggcgctccagacgattattgctaggcag
aagacggtcatcaaggacacagatggacaaagtaccgctacagcgtcgccagcgcctgga
gagaaagatgcaacagccactcccgaggggactcctgctccaggaaatcctttggatttt
tcaagcccgaaatctttgtcagatgctagccttttgaaaaaccacgagctccaaaagaaa
gtgttgcttgatgatccgaacttgcgtaacatattcacgcaatcggtcattaagttcaaa
ctctctcccaccatgttctggtcaagtcgtattggccagctacgaacttgcgccttgcag
atctcccagcataggggcccgtataacgttctttctacaatcaagccagttgcaacgtca
gataatcaggttaatgtcaacgtcacgagatctacaatcaacgagatttttgaaacgtac
cctatcatcaagcgtgcatttaacgagctcgtccctgccaagctcagtgaaggtgagttc
tggtcgagattcttcaactcaaagcttttcagacgtctccgtggtgacagaataaataca
cagaacacacgaggcgatgtcatcattgataagtatctcgaagagtctctggaagtccca
gacacgagtaagaaatcagcctctgagaagattaacactcgggagaaataccacgttaat
aagtttcttgatcttttcgggaacgaccaagataactcacaaaagttggggttgctgcct
gatttcaccatgaagttctctgatgagcatgcagaaggtaacgacgggacagcaccaggc
cagcagtctaaacgggataatgagatggtgattttgatgaaaaacatgaacaagctttcg
agtaagatggttgacatgaatgctgaggaggccaagaaatcagaagacgctgccgaggaa
gtcaaagagcatgagcaagagctagatctcaacgacttgaatgaaactgaagatttgcag
ttcattcagctacaccttgacaccgacagagcgagggtgattgctctgcacaagagagag
aagactcccgaggacgagaatgtgtcttgtgatgaactcggtctgttcttgataagtaac
gagttcaaagcctctgccactggaactgatttgagtgagacgtacaagtctcagagcaac
gatattgcgaaggctgccacagatatcactgctcttgtgaaatacaactatcgcacgttt
agatccttacataacttgagagatgcaactggcgcaactggcgagaagcttcttcctcag
gacgtcgtccaagacctactaacttacaacgtcaccattgtcgagtttttgctgcatttc
tggaatttattccttaactcgggaaatcccactcaattgaagaagattttcacaaacttg
agaacgtgtcaaagagctattgaagcacttgaactgaagatctcatcgcttatttccgag
aacccccatgttaaagcgaacgaaaagctccagccgaagctattaaaggatttggaaagc
tgtgtggcacccctcaaaagcagcttacacaaagcatgcaatgaatatattgcggctgta
aaagcatcgcaaaatgaggattcaaagctcaacagtaatggaaagcgtcctctagaagca
taa
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