Candidozyma auris: CJI96_0001733
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Entry
CJI96_0001733 CDS
T04850
Name
(RefSeq) hypothetical_protein
KO
K12879
THO complex subunit 2
Organism
caur
Candidozyma auris
Pathway
caur03013
Nucleocytoplasmic transport
caur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CJI96_0001733
09122 Translation
03013 Nucleocytoplasmic transport
CJI96_0001733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caur03019
]
CJI96_0001733
03041 Spliceosome [BR:
caur03041
]
CJI96_0001733
Messenger RNA biogenesis [BR:
caur03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
CJI96_0001733
Spliceosome [BR:
caur03041
]
Complex C
Other components
EJC/TREX
CJI96_0001733
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CJI96_0001733
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC2_N
Tho2
Thoc2
Motif
Other DBs
NCBI-GeneID:
40028418
NCBI-ProteinID:
XP_028890506
LinkDB
All DBs
Position
2:complement(598652..603148)
Genome browser
AA seq
1498 aa
AA seq
DB search
MAHSNANIHLTEDVIADFAGTGSQRLIEKLHVKDVPKDTMSEIFIEILICLEDGSLTSNA
IADFLQQAINDEEKAIIFCQALDVVPLTESMEALMGELNERQAVIKPKTIAENVDLALLT
SSNLAPVQSLNRQLNMKKRDIFYTQKNFNLFHEEFEGYSKLVQEMFNILKTSNNVGLVDF
AIRSTESLIGHYQLDPNRVLDILLDVFTHLIVGNHVFMIKFLKSSRWWPAEPATSDAGFE
ELRHGGSETAAKSLGLKFLKASKDEALTDTFKVMVAILVKEGFVSFGSIYKYVRPDDTEM
QDLEALYKKELDEKVFKSGASALALAAPLTSEDDISDKGANGSNKDEEQQSINETLQSRL
ETNITFQVLKAFLEVGLYWPSLYIITEFPFLVHVDALVPEYILRMVDVIISPLYENALKV
PESLIKALNKDRLSPQAHNMGSIKYKEVKPTRMFCLKPTSVLQSDKDLIYFYQEWSRNLP
RVDKIDAFFKLGQEIFKYLGTKLSADVAVFSKLCDVLTSQCVIHGNTEYKERCFNFFRNY
ILPAIGAIEENPVPVSKAFKFLQQFSVDDRFNLYGELHQVLAKNNLHVKINYNKAEKATK
DSLKRLSKENVAPMMKRLAKISYSNPLPCFLTILQQIESYDNLNSLVVDTAQYFSKYGWD
NLTLAILMRLTSLGRSNIQQDGLHERQWIQSLASFIGQLCHKYPDSIDLRTIVSYLVKSF
HLQESSGLLVFKEILALTGGLKPISNLTPHQIEMINSGESLEKLVYKTIDDTRFSSQLPG
TKLANVFLELDVVNEILVLLSNLNKAIIAGEELTHLKVLANRADDIDTVLHFFCTLVGFF
GDDEIPNNLQAITTLVDKYGVPIPWAFEIWRPYFTDTEVQGDIGEKFTCGVEPSLFTTFW
SLKLFDINFDRELYDSELSKLESTASSLRETLLVARKDRSSTSAFLQKLKADIVRTEDFH
AKIPAERDFHETHNKEVKELLKQRCRSWFLPNTDEELATAINTFLQECVFPRCVHSSFDA
IFSARFLFLVHELNPNNYSIIEALNQIFQSDIVFGALFTCTPSEAECLGIFYAEILKRLS
VWYNEEVFAGLAQATPLKKNISSSNLSLGDFKKILFEFHSSLLSDISRSLIANEYMCRRN
AITLMKNLFGVYPNVEDHCETIVDLIEKISTTEERDDLKLSSSALIGHVKSRSKSWVHMW
DFYDMSEDEKAKQIDKRKAIEENRERRKEALRRQKEEEERRMREEEERRRQEARLAEEEE
RKRKMEEERIEQQKQATAKALSYDNEGKAPIRQARNEEVERGRYDQYSRTTPRPETPKGP
SAQSRSADSMQNKASKVLEQKDLKVKKLASEETKPQQATPGHAKEPDVEKARDEAKPMED
AKTQSNIKRDSPAAEAPTQIRASTPSHRRPLPPQQPPRQPRFGSSGRHEDRGSRHDDRGS
RHDDRGSRHDDRGSRHDDRDNRKDSGNNKVYQRGPIRSQSTTPLPPRLHLHHPHQRRL
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atggctcattccaatgctaatatacatcttacggaagatgttattgctgattttgctggg
acgggctcccagaggcttattgagaaattgcatgttaaagatgttcccaaagataccatg
agcgaaatcttcattgagatccttatatgtctcgaggatggtctgcttaccagtaatgca
attgctgatttccttcagcaagctataaatgatgaagaaaaagccatcatcttttgtcag
gctttggatgtcgttcctcttactgagtcaatggaagctcttatgggagaacttaacgag
aggcaagccgtcataaaaccaaagactatagcagagaacgttgatttagctcttttgact
agtctgaaccttgctcctgtccaatcattgaatcgccaactcaacatgaaaaagagggac
attttctacacgcagaagaattttaaccttttccacgaagaattcgaaggatattccaaa
ttagtccaagaaatgttcaacatattgaaaacctccaacaatgtgggacttgtggatttc
gcaatacgatcaacagagtcgctcattgggcattatcaactagatcccaatagagttctc
gacattctcttagacgttttcactcatctaatcgttggcaatcatgttttcatgatcaaa
tttttgaaaagctccagatggtggcctgccgagccggccacttcagatgctggctttgaa
gaactccgtcatggtgggagtgaaacagctgcaaagctgcttggcctcaaattccttaag
gcgtctaaagatgaagcgctcacagacacttttaaagtaatggttgccatactagtcaag
gaaggttttgtaagctttggctcaatttacaagtatgttcgccctgatgatactgagatg
caagaccttgaggcgctatacaaaaaggagcttgacgagaaagtgttcaagtcaggcgca
agcgccttggccttggctgctcccttaacttctgaagatgacatctctgacaagggtgcc
aatggcagcaacaaagatgaagaacaacaatcaattaacgagacacttcagtcccggttg
gaaacaaatatcacctttcaggtattgaaagcttttcttgaagtcggtctctattggcct
tcactttacatcattaccgaatttccatttctcgtccatgttgatgcgttggtgccagag
tatattcttcgtatggttgatgtcataatatcgcccctatatgaaaatgcgttgaaagtg
cctgaatcgctaattaaggcgctaaataaagatcggctttcaccacaggcacataacatg
ggctccatcaagtacaaggaagtgaagccgacacggatgttttgcttaaagcccacttca
gtgcttcaaagtgacaaagacctcatttatttctatcaagagtggtctaggaatcttccg
agagtcgataagattgatgcctttttcaagctagggcaagaaattttcaagtacttagga
accaaattatcggcagacgtggcggtattttcaaagctatgtgatgtcctcacttcacaa
tgtgttatccacggcaacacagagtataaagaacgttgttttaatttcttcaggaattac
attttgcccgcaataggggcaattgaagaaaatcccgtgccagttagtaaagcatttaaa
ttccttcagcaattttcagtggacgatagattcaacttgtatggtgaattacatcaagtg
cttgccaaaaataatcttcatgtcaaaatcaattataataaggcagaaaaggccacaaaa
gattccctcaagagattgtcaaaggagaatgtcgctccaatgatgaaaagattggcaaag
ataagctattctaacccccttccgtgcttcttaactatcctccagcaaattgagagttac
gataacctaaactctttggtggtcgacacagcacaatatttcagtaaatatgggtgggat
aatcttaccttggccattctcatgagattgacatctttgggacgaagcaatattcagcaa
gatggtctacatgagcgacaatggatacaatccttggcatcgttcataggtcaattgtgt
cataagtatccggactcgattgatttgaggacaatcgttctgtacctagtgaaatctttc
catcttcaggagagttcggggctccttgtattcaaagaaatcctcgcgctaacaggcggg
ctcaaacctatatcgaatcttacaccacatcagatcgagatgataaatagcggtgaatct
ctcgagaaattggtgtacaagacaattgacgatacgcgattcagcagccaacttccggga
acgaagcttgctaatgtatttttggagcttgatgttgtgaatgagattttagtccttctc
tccaacctcaacaaagcaatcatcgccggggaggaactcacacatctcaaggttcttgcc
aacagagcagatgacattgatactgtcttgcatttcttctgcactctagtcgggtttttc
ggcgacgatgagatcccaaataatttgcaagccataacaacacttgtcgataagtatgga
gttcctatcccttgggcgtttgagatttggagaccttatttcacggacactgaggttcaa
ggagatattggggaaaagttcacatgtggagtcgagccttcactttttaccaccttttgg
agtttaaagctctttgatatcaactttgatcgggaactctacgattctgaactttcaaag
cttgaaagcactgcatcaagtctcagagaaactcttctcgtagctcgtaaagacagatcg
agcacgtcagcatttttgcagaaattgaaggctgatattgtcagaaccgaagattttcat
gctaaaatccctgctgaaagagactttcatgaaacacataataaagaagtcaaagagtta
ctcaagcaacgctgcagatcatggtttcttccaaacactgacgaggaacttgctactgcc
atcaatacatttttgcaagaatgcgtattcccaagatgtgttcactcatcatttgatgca
atattcagcgcaagatttcttttcttggtgcatgaactcaacccaaataactactctatt
attgaagctttgaatcagatttttcaatctgacatagtgtttggagctctttttacttgc
acaccatccgaagctgaatgtctcggaatattctacgcagagattcttaagagattatcc
gtttggtacaatgaagaggtctttgcaggtttagcgcaagcgactccgttgaagaaaaat
atttcgtccctgaatttgtccttgggagacttcaagaaaattttatttgagtttcattca
tctttacttctggacatatcgcgatcattgattgctaatgagtatatgtgtcgccgcaat
gcgataacattaatgaaaaatttatttggagtataccctaacgtcgaagaccattgcgag
accatcgttgacttgatcgagaagataagcactacagaagagcgcgacgatcttaaattg
tcgtctagtgctttgattgggcatgtcaaatctcggtccaagtcgtgggtacatatgtgg
gacttttatgatatgtcagaagatgagaaggcgaagcagatagacaaacgaaaagctata
gaggagaacagggaaaggaggaaggaagccttgaggaggcaaaaagaagaagaggagagg
agaatgagagaggaggaggaaagaaggagacaagaagcgaggttggcggaagaagaggaa
aggaagagaaagatggaagaagaaagaatagagcaacagaaacaagctacagcaaaagcc
cttagctatgataatgaaggaaaggctccaatccgtcaagctcgtaatgaagaggtggag
cgtggtcgatatgatcaatattcaagaacaactccacgtccagagactccaaaaggcccg
agtgcacaaagcagaagcgctgattcaatgcagaacaaggcatcaaaagtattggagcaa
aaggatttgaaagtcaaaaagttggcgagtgaagaaacaaaacctcaacaggcaacaccg
ggccatgctaaggagcctgatgttgagaaagcaagagatgaagctaagccgatggaggat
gccaaaacgcaatctaacataaaaagagattctcctgctgctgaggctcccacgcagatt
agagcgagtaccccctcacatagaagacctcttccaccccagcagcctccacggcagcca
aggtttgggtctctgggtcgtcacgaagacagagggagccgtcacgatgacagagggagc
cgtcacgatgacagagggagccgtcacgatgacagagggagccgtcatgatgacagagac
aatcgaaaggattccggaaacaacaaagtataccagcgtggtcctataagatcccaaagt
actaccccactccctccccgtctacacctccaccacccccaccaacggcgcctttga
DBGET
integrated database retrieval system