Candidozyma auris: CJI96_0002119
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Entry
CJI96_0002119 CDS
T04850
Name
(RefSeq) ATP-dependent DNA helicase SGS1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
caur
Candidozyma auris
Pathway
caur03440
Homologous recombination
caur03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CJI96_0002119
03460 Fanconi anemia pathway
CJI96_0002119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caur03032
]
CJI96_0002119
03400 DNA repair and recombination proteins [BR:
caur03400
]
CJI96_0002119
Enzymes [BR:
caur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CJI96_0002119
DNA replication proteins [BR:
caur03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
CJI96_0002119
DNA repair and recombination proteins [BR:
caur03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
CJI96_0002119
Bloom's syndrome complex (BTR)
CJI96_0002119
FA (Fanconi anemia) pathway
CJI96_0002119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
RecQ_Zn_bind
Helicase_Sgs1
HRDC
Motif
Other DBs
NCBI-GeneID:
40028804
NCBI-ProteinID:
XP_028890877
LinkDB
All DBs
Position
2:complement(1433076..1437092)
Genome browser
AA seq
1338 aa
AA seq
DB search
MAIQNNLKELRSWVETSKPYLPPQWQCEVLLRSELPAKAPRRDPIFKLPGSKPANTQKVQ
AQSSTSATPLTPNNAATAQLPRGSQPLMASTQLQEQLEELSDFSDNESLKLIDTRALPPL
EPKRMEHTRLPGKRPLVARKQSTLEAHLPKKPSSVQKATEVKDPTSHIPASSDVSRAATN
NDSNVDLLQAYIKLCEEKINLLVKRHAVSESTSLSLDAKNQWVSKNFATKYSNVDAEQTK
MRSQFSFLGPQSSEEDFSKLSSFSSEIPATSMGIPSSIQVDSPRIDPDSQLRDVHFTSSN
QRQAVHRDELQIPFSPAPESIPSPEPKSAAREPIPDPESSPFKLSPFSPTQRTQANDYEK
NREEARQIIMEARKRKENGTAPRHTYFIDDDDDMEDDFGEEYMDGLRSSQADERDTDLSG
FIAPDDVESIDDTYVSPRATQIDTDQEDSEIDDTNLRSPQKDDLQDELENIKLSQDVAER
YGLKYTQQDRNGDSNEIEMVEVSDEEEEANPMDFTTQLNEARDEIVEIPSEDDMDDEDMA
ALNELSHNKIKVEPNQVIISDEDFSDDDDELLQLSKSVGNDMNSSGAKAIPGSEKFIGEV
YDILQKTFKLPNFRPNQLEAICSTLIGKDVFVLIPTGGGKSLCYQLPALVKGGTTKGTTV
VISPLISLMQDQVQHLLDKNIRAGMISSKGTSEERNATFKQLTSGQLDLVYLSPEMVNNS
VRVQKVLSKLYETEMLARVVVDEAHCVSSWGHDFRPDYKGMSMFKQQYPDVPIMALTATA
NEKVRLDIVHHLRMSDPVLLKQSFNRTNLFYEVKSKPPNIYDWMRDYIQRNRRGQTGIIY
CHSKQSCETTSQKLNEFGIRSMFYHAGMDPNERFEVQTKWQKNDLQVICATIAFGMGIDK
PDVRFVIHIYIPRSLEGYYQETGRAGRDGKESECIMFYSYKDARSLQSLIQRDDKLEEPA
RESHLAKLKQVVQYCENKADCRRKQVLHFFNEEFDPAKCNKKCDNCCSETVAVTKDVTDH
CINIVKLVQEIQNDKVTTIHCQDVYRGSRGGKVLKLGHHENQYHGLGSSLDRGAIERIFF
HLQSEGCLLEYQIMKGGFASSYVKLGPNARALMNGRKKIQLSFVKADSSNKNERARLVAT
GNGNGLQAYKYQDSFVSARQMRNEEQEKENLYQSTNGKISLPRNNFNGLINANNEDAAEH
AFQELKKIRHEKSQELRFARPSYFVEDAALREMAVKLPTNARDFAKLENIKKDQAPYFQY
FKKVLTTLARERKKASQEASSTPQATSQYFPQTQRKRTQSQKGQSQKRHKSSKGASRSQG
PKKSNGLSSSGLVRSMPI
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atggccatacaaaacaacctcaaggaactccgatcgtgggtggaaacgctgaaaccttat
ttgccgcctcagtggcagtgtgaagtgctcctaaggctggagttgccagccaaagcgcct
cgaagagaccccatcttcaagttgcctgggtccaagccggcaaatacgcaaaaagtgcaa
gctcaaagttcgacatctgctacgccgttgacaccaaataatgccgctacagcgcagcta
cctcgtggttcccagccgctaatggcatccacacagctacaggaacagctagaagagcta
ctggatttcagcgataacgagtctctcaaactcattgacacacgagcactaccaccgttg
gagccgaaaaggatggaacacacgcggcttccaggcaagcggccgttggtggctcgcaaa
cagtctactttggaagcgcatttaccgaagaaaccatcttccgtgcagaaggcgacggaa
gtcaaggatcccacgtctcacatcccggcttctctggacgttctgcgtgcggccactaat
aacgactccaacgtagacttgcttcaggcgtacatcaagctttgcgaggagaagatcaat
ttgctagtgaagagacacgctgtgagtgagtcgacttccttatcactagatgctaagaat
cagtgggtttcgaaaaacttcgctacaaaatacagtaatgtggacgctgaacagacgaaa
atgcgctcacagttctcgtttctcggcccgcagctgtcagaggaagacttctcaaagctt
tcaagcttctcttcggaaataccagcaacttccatgggcattccgtcaagcatacaagtg
gactcgcctcgaatagaccctgactcgcaattgcgagatgtccatttcacctcctcaaat
caacggcaagctgttcatcgtgatgagctacagattccattctctcctgctcccgaaagc
atacctagtcctgagccaaaatcagccgccagagagccgattcctgacccagagtcgtct
cccttcaagttgtcgccattttcgcccactcaaaggacacaggccaacgactacgagaaa
aacagagaagaagcacgtcagatcatcatggaagccaggaaacgcaaggaaaacggcacc
gctcctcgacatacttattttatcgatgacgatgatgacatggaagatgactttggcgaa
gagtacatggatggtttgaggtcgtctcaggccgacgaaagggacactgatctcagcggc
ttcattgctcctgatgatgtagaatctatcgacgatacgtatgttagtccgagagctact
cagattgacaccgatcaagaggatagtgaaatcgatgatactaatttgcgtctgccccag
aaggacgatttacaagacgagcttgagaacataaaattatcgcaagatgtggctgaaagg
tacggattgaaatatacccaacaagatcgaaatggtgatagtaatgaaattgagatggtt
gaagtcagtgacgaggaagaagaagcaaatccaatggactttaccacgcaactcaatgaa
gctcgtgatgagatcgtggagattccttcggaggatgatatggatgacgaggatatggct
gcgctcaacgaactttcgcacaataagatcaaagtagagccaaaccaagtgattatcagc
gatgaagatttcagcgatgatgatgacgaacttctacaactctccaagtcagttggtaat
gatatgaactcctcgggagcaaaagccattccaggatccgagaagttcattggtgaagta
tacgatatccttcaaaagacattcaagcttccgaactttcgcccaaatcagctcgaggct
atatgctcaacattgattggtaaagatgtgtttgttttgattcccacaggtggtggcaag
tccttgtgttatcagcttccagcactagtcaaaggtgggacgacaaaaggcacaacggtc
gtcatctcaccgttgatctccttgatgcaagaccaggttcaacacttattggataagaat
attcgtgcgggcatgataagttccaagggcacaagtgaagaacgtaacgcaactttcaaa
cagttgacatccggtcaattagacctcgtttacttatcaccagaaatggtgaacaactct
gtcagggttcagaaagtactttctaagctttatgagactgagatgctcgcaagggtggtc
gttgacgaggctcattgcgtcagttcatggggtcacgacttcagacccgattacaaaggc
atgagtatgttcaaacaacagtaccctgacgttccaatcatggcacttactgccacagct
aacgaaaaagttcgactcgacatcgttcatcatcttcgtatgtctgacccagtattgtta
aaacaaagcttcaatcgcaccaatttgttctatgaggtgaaaagcaagcctcccaacatt
tatgattggatgagagactacatccagcgaaacaggcgtggtcaaacgggtattatttat
tgtcattccaagcagtcttgcgagactacctcacaaaagctaaacgagttcggtatacgc
tccatgttttaccacgctggtatggatccaaatgagaggtttgaggttcagacaaaatgg
caaaagaatgatttgcaagtcatctgtgccacgattgcattcggaatgggtattgataag
ccagatgttcgttttgttatacatatctacatcccccgttccctagaggggtattaccaa
gagaccggtcgtgctggaagggatggaaaagagagtgagtgtattatgttctactcctac
aaagatgcaagaagtctccaaagcttaattcagagggatgataagttggaagaacctgca
agagagtctcatcttgcaaagttaaagcaggtcgtacagtattgcgaaaacaaagcagac
tgtcgacgcaaacaagtccttcacttcttcaatgaggagtttgatcctgccaaatgcaac
aagaagtgcgacaattgttgcagcgaaaccgttgctgtgacgaaggatgtaacagatcac
tgtatcaatattgtgaaacttgttcaagagattcaaaacgacaaagtgactacaattcat
tgtcaagatgtatacagaggttctcgagggggaaaggttttaaaacttgggcatcatgag
aatcagtaccatggactcggaagcagcttggataggggagctatagaaagaattttcttc
catttgcagagcgagggttgtttactagagtatcaaataatgaaaggtggcttcgcgtct
tcatatgtcaagcttgggccgaatgctagagctctcatgaacgggcgtaagaagattcag
cttagtttcgtgaaagcggactcgtcaaacaaaaacgagagggccaggcttgtcgccacg
ggaaacggaaacggtttgcaagcttacaagtatcaagactcgtttgttagtgcacgtcag
atgaggaatgaggagcaggaaaaggaaaacctctaccagtccaccaatggaaagatctct
cttcctcgcaacaacttcaatgggttgataaacgccaacaacgaggacgctgccgagcat
gcgtttcaagaattaaagaaaatacggcacgagaagctgcaagagttacgattcgccagg
ccaagctactttgtagaagacgctgctctcagagagatggcagtcaaattacctacaaat
gcgagagactttgccaagcttgagaatatcaagaaagaccaagcgccgtactttcagtat
tttaagaaggtgttaactacacttgcgagggagcgcaagaaggcatcgcaagaagcttct
tccactccgcaagctacatcgcagtacttcccacaaacccagagaaaaagaacccagtcg
cagaagggacagtctcagaaaagacacaagagctctaagggtgctctgaggagtcaaggt
ccaaagaagagcaacggccttagtagctcaggtctcgtgagactgatgccaatttga
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integrated database retrieval system
