Candidozyma auris: CJI96_0002150
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Entry
CJI96_0002150 CDS
T04850
Name
(RefSeq) CCR4-NOT core subunit NOT5
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
caur
Candidozyma auris
Pathway
caur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJI96_0002150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caur03019
]
CJI96_0002150
Messenger RNA biogenesis [BR:
caur03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CJI96_0002150
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CJI96_0002150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
40028835
NCBI-ProteinID:
XP_028890908
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Position
2:complement(1511695..1513569)
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AA seq
624 aa
AA seq
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MSTRKLQQECDKLQKKITEGLSVFDDIHEKIGQTDNASQKERLEGDLRKEIKKLQRCRDQ
VKQWLGDSSVKLDKNLLQDNRSKIENAMERFKEVERVSKMKQFSNEGLEMQTKLGATDED
EAKKNEACRYITDILEELGRQNELLSGELSGYSGKKKSGNAQVAIDELNQKIDRNNLHIG
KLEQILHNLTNEQLKPERIDEIKDDLDYYVENNQAADFIEYNDFYDQLELDEAPESFPAA
TMPGALHDDTKSSKEDSNPRSPAKKDTPTSNGTPSTSSATTAATTITNQSSHPTRPPASA
PTTSSASASLSNSGSTTQPHTIHSSQGSLASKPPMGTGPSAAGLAQVRAPPPGLGSSSKS
GSPVPLAATPKSSAAELKKKVASSQAGSSSGITPGISVAAALSNSINNNSNTKNASPALS
HASTATTVGSSNKAASEAQSAAANPLTQETKYLSEAAVRVHAISQNRLANPLPFSAISQL
LETSLLNCPDSSDAERPRQYNPRNVHPSSVDYPQEPMFELNSARIMSKFDNDTLFFCFYY
SEEQDNIARYNAARELSKRGWIFNSKTKQWFSKDDRAKSRSASVAQGVEEKSQGESYKYF
DYQSSWLIRRKDHYKLQPEVQETF
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgagcacacggaaactacagcaggagtgtgacaagctacaaaagaaaatcactgaagga
ttgctggtgtttgatgacatccacgaaaagattggccaaacggataatgccagtcagaaa
gagaggctagagggagacttgaggaaagaaatcaagaagttgcagaggtgtcgtgaccag
gtgaagcagtggcttggggacagcagtgtgaaacttgataagaaccttttgcaggataat
agaagtaagattgaaaatgccatggaacgatttaaagaggtggagagggtatccaagatg
aaacagttctcgaatgagggtttggaaatgcagacaaagctcggtgctacagacgaagat
gaagcgaagaaaaatgaggcttgccggtacattacagatattcttgaagaattggggaga
cagaatgagcttttgagtggtgagctcagtggttactcgggtaagaagaagctgggaaat
gcacaagttgctatagacgaattgaatcaaaaaatagacagaaacaatttgcacattggc
aagctcgaacagatacttcataacctcacgaatgagcaattaaagccggagagaatagac
gagatcaaggacgatctagattattacgtggagaataatcaagctgcggattttatcgaa
tacaatgacttctatgatcaacttgagctcgatgaagcgccagagagcttcccagcggca
accatgcctggggcattgcatgatgatacaaagagttcaaaggaggactcaaatccaagg
agcccggcaaagaaggatacgcctacaagtaatggtacgccaagtacgtcctcagctact
acggctgctacgaccattactaaccagtcatcgcaccctacacgtcctcctgcttccgca
cctacgacgtcctctgcaagcgctagcttgtcgaacagcggcagcacaacgcaacctcac
acaatacactcttcgcaagggagtctagcatctaaacctccaatggggactggaccatct
gctgcgggacttgctcaggtacgtgcaccgcctccaggtttgggttcttcgtcaaaatct
ggcagccctgtacctttggcggcaacgcccaagtcgagcgccgctgaacttaagaagaag
gtcgcttcctcgcaagcaggctcttctctgggaattacaccaggaatatctgtcgcagcg
gcactttcaaactccatcaacaataacagtaatactaagaacgcatcgcctgcattatcc
catgcgtctactgctaccactgttggttcatcaaacaaagcggcatcagaggcccagtca
gcggcagctaacccactcacgcaggagacaaagtacttaagcgaagcggcagttcgcgta
cacgccatttctcagaatcggttagccaacccattgccattcctggcaatcagccaatta
ctagagacctctctcctcaactgtccggactcatcggacgccgaacggcctcgtcagtac
aacccaaggaacgtccacccactgtccgtggactatcctcaggaaccaatgtttgagctc
aattctgcgagaatcatgtctaagttcgacaatgatacgttgtttttctgcttttactac
agtgaagagcaggataacatcgccagatataacgctgccagggagttgagcaaacgtggg
tggatattcaactcgaaaacgaagcagtggttttccaaagatgaccgtgccaagagtcgc
ctggcatctgttgcacaaggagtagaggagaaactgcaaggagagagctacaagtacttt
gactaccagagtagctggctcattcgtcgcaaggaccactacaagttacagcccgaggtg
caagagacgttttga
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