Candidozyma auris: CJI96_0002280
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Entry
CJI96_0002280 CDS
T04850
Name
(RefSeq) RNA-dependent ATPase ROK1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
caur
Candidozyma auris
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caur03009
]
CJI96_0002280
Enzymes [BR:
caur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CJI96_0002280
Ribosome biogenesis [BR:
caur03009
]
Eukaryotic type
90S particles
Helicases
CJI96_0002280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-GeneID:
40028967
NCBI-ProteinID:
XP_028891040
LinkDB
All DBs
Position
2:complement(1778085..1779731)
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AA seq
548 aa
AA seq
DB search
MDIFRILSRGAALKTSKSATADFSGNSHKEKTEKDPSSIQADVDRETDFFRTKTHKKKPE
ETNQPEKKTEAEEPPKAVITNSEEAAKFRKSAGSKVSGHDVPLPIGSFEDLVSRFQINKR
LLHNLLDAEFVEPTPIQCEGIPAALNDRDLIGCAPTGSGKTLAFLIPMIQTLLQTAPQKN
KKIRGLIIAPTNELASQIFQQLQVLTKGYKNLPSAILSRQMATRLQDGIVSSTKYAIIVS
TPLRLLDIVKNGHADLTTVEQLVIDEADRLFDKGFVEQTDALLANMTNPKLRKSIFSATI
PSGVEELANSIMRDPVRIIVGHKEAASSNIDQKLVFTGSEDGKLVAIREMLQKGEFKPPV
IIFLQSITRAKALFHELLYDKLNVDVIHAERTPKQRDEVIKRFKNGDIWVLITTDVLARG
VDFRGVNLVINYDVPQTAQAYVHRIGRTGRGTNKGKAVTFFTKEDTQAVKPIVNVMKQSG
CSDGYSDWMENMGKLSYFDKRKVKTQQIERAGISTVPKIVKQKRKQRQEMIEASKRRKQQ
SKKGGDDN
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggatatttttagaatcttaagtcggggcgctgctctcaagacgagtaaatctgccacg
gcagatttttcgggaaactctcataaggaaaaaactgagaaagatcctagctccattcag
gctgatgttgatagagaaaccgatttctttaggacaaaaacccataagaaaaagccagaa
gaaacaaatcaacccgaaaaaaagaccgaagctgaggagcctccaaaagctgtcatcaca
aactcagaagaagcagcaaagtttcgtaaatctgcaggttctaaagtgtcgggccacgat
gtacctttacccattggctcattcgaagaccttgtgtctcgtttccaaataaacaaaaga
ctactacacaaccttctagacgctgagtttgttgagcccacgccgatccagtgtgagggg
atccctgcagcattaaatgatagagatcttattgggtgtgcacctacaggttccggtaag
acgttggcatttttgatcccgatgatccagactcttttacagactgctccacagaaaaac
aagaaaatcagaggtcttattattgctcccacaaatgagttggcatcgcagatatttcaa
caactacaagttctcacaaagggatacaaaaacttgcctagtgctattctttcgcgacaa
atggccacaaggcttcaggatggaattgtgtcttctacaaaatatgccattatagtctcc
acgcccttgcgtcttcttgacattgtcaaaaacggtcacgcagacttaaccactgtggaa
caactagtcattgatgaggccgataggctttttgacaagggctttgtggagcagacagat
gctcttttggccaacatgacaaaccccaagttgcggaaatctatattctcggccacaatc
ccatccggtgtggaggaacttgcaaattcgatcatgagagacccagtccgaatcattgtg
ggccacaaagaggcagcttccctgaatattgaccagaaattggtgttcacgggaagtgaa
gacggcaagctcgtggccatccgtgaaatgctacagaagggcgagttcaagcctcctgta
attatattcttacagagcattactcgtgcgaaggcgttattccacgaattgctctatgac
aagttgaatgtggacgttatccacgcagaaaggacgccaaaacaaagagacgaggtgatt
aagaggttcaagaacggtgacatctgggttctcatcactactgacgttttagctagaggt
gtggactttcgaggcgtgaatctcgttatcaactacgacgttccacaaactgcacaagca
tacgttcacagaatcggtagaacaggccgtggtactaacaagggcaaagcggtgacgttt
ttcacgaaggaggacactcaggccgtgaaaccgatcgtgaacgtgatgaagcagtcagga
tgctccgatggctacagtgattggatggagaacatgggcaaattgtcttattttgacaag
aggaaagtcaagacacagcagattgagagagcaggtatcagtacagtgccgaagattgta
aagcaaaagaggaaacagcggcaagagatgattgaagcgtccaagaggagaaaacagcag
agcaaaaaagggggagatgacaattga
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