Candidozyma auris: CJI96_0002398
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Entry
CJI96_0002398 CDS
T04850
Name
(RefSeq) CCR4-NOT core subunit CAF40
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
caur
Candidozyma auris
Pathway
caur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJI96_0002398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caur03019
]
CJI96_0002398
Messenger RNA biogenesis [BR:
caur03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CJI96_0002398
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
40029087
NCBI-ProteinID:
XP_028891157
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Position
2:2055562..2056524
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AA seq
320 aa
AA seq
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MSKDASDLPPPPSDGQKIKALNDKHIYQWITELATGSNRERALLELGKKREQYDDLALVL
WNSFGVMTALLEEIISVYPFLNPPVLTASVSNRVCNALALLQCVASNAQTRGAFLNANMP
LYLYPFLSTNARQRSFEYLRLTSLGVIGALVKNDTPEVINFLLATEIVPLCLNIMEISSE
LSKTVAIFILQKILLDDQGLSYICTTYERFHTVASVLSKMIDQLSASVGSSSIATQAEHQ
VSHSSSNLHSGQPPSGSSGRLLKHVVRCYMRLSDNLEARKALASILPEPLRDGTFSSILQ
DDIATKRCLGQLLLNINEEN
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagatgcatctgatctacctccaccgccatcagatgggcaaaaaataaaagcg
ttgaatgacaagcacatatatcagtggattacggaattggcgacaggcagtaatagagaa
agagctttactcgagttgggaaaaaagagagagcagtatgacgatcttgcattagtgctt
tggaactcgtttggtgtgatgacagctcttttagaagagatcatttcagtctacccgttc
ttgaatcctccagtgttgacggcctccgtctcaaatagagtttgtaatgctctagcattg
ttacagtgtgtcgcatctaacgctcaaacaagaggcgctttcctcaatgcaaacatgcct
ttgtatttatacccgtttttgtctacgaatgcgagacagagatcgtttgagtacttacgt
ctaactagtttgggagtgatcggtgcgttagtgaagaatgatacaccggaagtcatcaat
tttcttttagcgaccgaaattgtaccgttatgtttgaacatcatggaaatttcctcagag
ctatccaaaactgttgcaatttttatccttcagaagatattgctagatgaccaaggtctt
tcatatatttgcacgacgtacgagagatttcatacggtggcttccgtcttatcaaagatg
attgatcaacttagtgcttctgtgggttcatcaagtattgctactcaggctgagcatcag
gtatctcactcttcaagcaatttgcattctggtcagcctccatccggtagttctggtcgt
ttactcaagcatgtagtccgctgctacatgcgtttatcagacaatttagaagcaaggaag
gcacttgcatctatattaccagaacctttgagggatgggacattctctctgattttgcaa
gacgatatagcaacaaaacgctgtcttggacaacttttattaaacatcaacgaagagaac
tag
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