KEGG   Candidozyma auris: CJI96_0002540
Entry
CJI96_0002540     CDS       T04850                                 
Name
(RefSeq) DNA-directed_RNA_polymerase_I,_II, _and_III_subunit_RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
caur  Candidozyma auris
Pathway
caur03020  RNA polymerase
caur03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:caur00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CJI96_0002540
  09124 Replication and repair
   03420 Nucleotide excision repair
    CJI96_0002540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:caur03021]
    CJI96_0002540
   03400 DNA repair and recombination proteins [BR:caur03400]
    CJI96_0002540
Transcription machinery [BR:caur03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CJI96_0002540
  RNA polymerase III system
   RNA polymerase III
     CJI96_0002540
  RNA polymerase I system
   RNA polymerase I
     CJI96_0002540
DNA repair and recombination proteins [BR:caur03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CJI96_0002540
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N SH3_2 DUF3648 Mrr_cat
Other DBs
NCBI-GeneID: 40029227
NCBI-ProteinID: XP_028891295
LinkDB
Position
2:complement(2367745..2368386)
AA seq 213 aa
MDDVERSISRLWRTFRTVKEMVRDKGYFITDAEINMTLDEFKSKICPMGEPQRKLMCFQA
QPTPEALERFPEMGSLWVEFCDEASVGIKTMRNFCIHITEKNFSTGIFIYQNSITPSANK
LIPTVAPATIEVFQESDLIVNITHHELVPKHIRLSKLEKKELLERYRLKESQLPRIQRED
PVARYLGLKRGDVVKIIRRSETSGRYASYRICL
NT seq 642 nt   +upstreamnt  +downstreamnt
atggatgacgtcgagagatcaatctcccgtttgtggagaacattcagaacggtgaaggag
atggtcagagacaagggttacttcatcaccgacgcggagatcaacatgacgttggatgag
ttcaaaagcaaaatctgtcccatgggcgagccacagagaaaattaatgtgtttccaggct
cagccaacgcccgaggctttggagagatttccagagatgggctccttgtgggttgagttc
tgcgacgaggcgtctgttggtatcaagaccatgagaaacttctgtattcacatcactgag
aagaacttcagcacgggtattttcatctaccagaactcgataacgcccagtgccaacaag
ttgattcccaccgtagcacccgccacgatcgaggtatttcaagaaagcgacttgattgtc
aacatcactcaccacgagttggtgcccaaacacattcgtttgtcaaagctcgagaagaag
gagttgttggagagatacaggttgaaggagtcgcagttgcctcgtatacaaagagaagac
cctgttgcccgttatttgggattgaagagaggagacgttgtcaagatcatcagacggtcc
gagacatcgggccggtacgcatcgtacagaatctgcttgtga

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