Candidozyma auris: CJI96_0002564
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Entry
CJI96_0002564 CDS
T04850
Name
(RefSeq) exosome catalytic subunit DIS3
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
caur
Candidozyma auris
Pathway
caur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJI96_0002564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caur03019
]
CJI96_0002564
Messenger RNA biogenesis [BR:
caur03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
CJI96_0002564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Rrp44_CSD1
Rrp44_S1
OB_Dis3
PIN_4
CSD2
OB_HELZ2
OB_RNB
DUF4862
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
40029251
NCBI-ProteinID:
XP_028891319
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All DBs
Position
2:complement(2425291..2428221)
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AA seq
976 aa
AA seq
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MLSKKRLSSGLTATHKVFVRSRHGGCTKIVREHYLRNDIPCYSKLCTKCPDIVKPDAQGN
LPEFILSDSPLKLKDGIGHYVIVDTNVVLQAIDLLEHPDCFYDVIIPQVVLEEVKNRSFP
IYQRLRALVKAADKRFVVFHNEFKEETYVNRQKNETINDRNDRAIRRCVKWYHDHLNNNN
SKIPVNIVFVCNDRDNREKASKEGSDARSLVDYVESLPKGEELRELIPTENESFDKNADE
ISFPEYYSTSRTMAGIRNGTLYQGIMNISTYNILEGTVSTPAFKKPLLIVGTHNLNRAFN
GDLVIVELLPKDKWREPSSTIVEESAIGANDNPDEDAKESVISDKERRVLAQEALKATSA
KERRLQPTARVVGITRRSWRFYVGQIAPSSVSLEDDTGNSSKTCFVILMDKLLPKIRIKT
RKAKDLLGQRIVVSVDSWPADSKYPQGHFVRSLGEIESVQAETEALLLEHDVEYRPFSKA
VLDCLPKEGENWTVPEKLDTDEQLKKRVDLRDKLVCSIDPPGCVDIDDALHARQLPNGNY
EVGVHIADVTHFVKPNTALDNEGAARGTSVYLVDKRIDMLPMLLGTNLCSLKPYVDRFAF
SVIWEVDENADIVNVNFMKSIIKSREAFSYEQAQNRIDDPSQQDELTKSMRILLKLSKLL
KQKRLDAGALNLASPEVKVHMDSETSDPGEVEIKKLLETNSLVEEFMLFANISVARKIYD
AYPQTAMLRRHAGPPATNFEELNEMLRVRKNGLTISLESSKALADSLDRCVDNKDPYFNT
LIRIMSTRCMMAAQYFSSGSYGYPDFKHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIG
YEMLDLSHRDKGKMELIVRNINKKHRNAQFAGRASIEYYVGQVMKNNEENQEGYVIKCFN
NGIVVLVPKFGIEGLIKLEVLGDMNTAEYNEEKYELTFTDFKGKRRTIAVFDKVTVEVKS
VKDEVSGKRKAQLSLA
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgttactgaaaaaaagactttcgtcggggcttacagctacccacaaagtctttgtgagg
tctagacacggtggatgcaccaaaatcgtcagagaacactacttgagaaacgatatacct
tgctattcaaagctttgcacgaaatgcccagatattgtcaagccagatgcccaaggtaac
ctacctgaatttattttgtcagattctccgttgaaattgaaagacggtataggtcattat
gtgattgtcgacaccaatgttgtcttacaggcgatagatcttctagagcacccagactgc
ttttatgatgtgattattcctcaagtagtccttgaagaagtgaaaaacaggtcttttcca
atataccagagacttagggctttggtgaaagcggcagataagagatttgttgtgtttcac
aatgaatttaaggaggaaacatatgtcaatcgtcagaaaaacgagaccataaacgataga
aacgatagagctataagaaggtgcgtgaagtggtatcatgatcatttgaacaacaataac
agcaagatccctgttaatattgtgttcgtgtgtaacgatagagacaacagagagaaggct
agcaaggaaggttcagacgcaaggtctttggtcgactacgttgagagcttgcctaagggt
gaagagctcagggagttgatccctactgagaatgaatcttttgacaagaatgctgatgag
atctctttcccagaatactactctacctccagaaccatggcaggtattagaaatggtacc
ttgtatcagggtatcatgaacatctcaacatataacatattggagggtactgtcagcacg
cctgcgttcaagaagcctcttttgatcgtgggtacacacaaccttaatcgtgcgttcaac
ggcgatctcgttattgtggagttacttcccaaagacaaatggagggagccttcgtccacc
atcgtcgaggaaagcgccataggtgccaacgataatccagatgaggatgccaaggagagt
gtcatctcggacaaagaacgtcgtgtgttggctcaggaagccctcaaagcaacatctgct
aaggaaagaagacttcagcctaccgctagagttgttggcatcacaagaagatcatggaga
ttctacgtgggtcagatagcgccatcatcagtatccctcgaggatgatactggtaactcc
tccaagacctgtttcgtcattctcatggataagcttcttcccaaaatccgtatcaagacg
agaaaggcgaaggatcttttaggtcaaagaattgttgtttctgttgactcttggccagca
gactcaaagtacccacaaggtcactttgtgagaagtttgggtgagatcgagagtgttcag
gctgaaacggaggcattacttcttgaacacgatgtcgagtacagaccgttctccaaggct
gtcttggactgtttgcccaaggagggtgagaactggacggttcctgagaaattggataca
gacgaacagttgaagaagagggttgatttgagagacaaactcgtttgctccattgatcca
ccaggatgtgtggatattgacgatgctcttcacgccaggcagcttccaaatggtaattat
gaggttggtgttcacattgcagacgtaacgcatttcgtgaagccaaatactgctctcgac
aatgaaggtgcggctcgtggtacttctgtctatttggttgataagagaatcgatatgttg
cccatgcttcttggtacgaacttgtgttctcttaagccttacgttgacagatttgccttt
tcggtcatctgggaagtcgatgagaatgcagacattgtgaacgtcaacttcatgaagtcg
ataatcaaatcgagggaagcattctcctacgagcaagcacaaaacagaatagacgatcct
tcacagcaagatgagctcacgaagtcgatgagaattctccttaagctctccaaattgctc
aagcaaaaaaggcttgacgctggtgcattaaacttagcatcccctgaggtcaaggtgcac
atggatagcgaaacgtccgatcctggtgaggtcgagatcaagaaattgttggagacaaac
tctttggttgaagagtttatgttgtttgccaacatttctgttgctcgaaagatctacgat
gcatacccacaaactgccatgttgagaagacacgccggaccgccagccactaatttcgag
gaactcaatgaaatgttgagggtgaggaaaaacggattgaccatctctttggagtcgtcg
aaggctcttgcggactccttagacagatgtgtcgataataaggatccgtatttcaacaca
ctcatacgtatcatgtccacacgctgcatgatggcggctcagtatttttcttcaggctcc
tacgggtaccctgatttcaagcattacggtcttgcagtcgacatatacacgcacttcacc
tcgccaatcagacgttattgtgacgttgtcgcccacagacagcttgctggagccataggt
tacgagatgttagacttgagccatagagacaagggaaagatggagttgattgtgagaaac
atcaacaagaagcacagaaacgcccagtttgccggtagagccagtatagagtactacgtt
ggccaggtgatgaagaataacgaggagaaccaggaagggtatgtgatcaagtgtttcaac
aacggtatcgttgtacttgttcctaaatttggtattgaagggttgattaagttagaagtc
ttgggagacatgaacactgcagagtacaacgaggagaagtacgagttgaccttcactgac
ttcaagggcaagagaagaactattgccgtgtttgacaaggtaacggtcgaggtgaagtcc
gtcaaggacgaagttagcggaaagagaaaggcacaactttcgttggcataa
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