Candidozyma auris: CJI96_0002797
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Entry
CJI96_0002797 CDS
T04850
Name
(RefSeq) ATP-dependent_RNA_helicase_DED1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
caur
Candidozyma auris
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caur03019
]
CJI96_0002797
03041 Spliceosome [BR:
caur03041
]
CJI96_0002797
03036 Chromosome and associated proteins [BR:
caur03036
]
CJI96_0002797
Enzymes [BR:
caur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CJI96_0002797
Messenger RNA biogenesis [BR:
caur03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CJI96_0002797
mRNA cycle factors
Common to processing body (P body) and stress granule
CJI96_0002797
Spliceosome [BR:
caur03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
CJI96_0002797
Chromosome and associated proteins [BR:
caur03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CJI96_0002797
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
40027461
NCBI-ProteinID:
XP_028889581
LinkDB
All DBs
Position
3:complement(364236..366149)
Genome browser
AA seq
637 aa
AA seq
DB search
MTDLAQDMNKLSVNGDARNGASATQNGAPANGGANGSADQPQKRQYVPPHLRNRPQGQTR
SDFGGSGSNGRGSSSGRGFAFGGSGSYGGGRRGGGYGSASRAPNPRSGQGRWVDGKHEPS
PRNERIELELFGSAEESGSSTSGINFDNYDDIPVEASGDDVPDAITSFTAPPLDELMVEN
ITLSRFTKPTPVQKYSMPIVAKGRDLMACAQTGSGKTGGFLFPVLSECFKNGPLPVPDTA
GPFSYNKVYPTVLIMAPTRELVSQIFEEAKKFCYRSWVRPAVAYGGVDIGQQMRTLQRGC
DLLVAAPGRLTDMLERNRVSLANVKYLILDEADRMLDMGFEPQIRHIVQECDMPDVQDRQ
TLMFSATFPRNIQMLARDFLKEYIFLSVGRVGSTSANITQKVLLVEDDEKRSVILDLLSA
ADLGLTIVFTETKRMADYLADFLYDQGFPATAIHGNRTQYEREKALAAFKNGTAPILVAT
AVAARGLDIPNVQHVINYDLPTDIDDYVHRIGRTGRAGNVGIATSFFNRNNKIIVKDMIS
LLTEASQEVPDFLIKISRESSYGGRGGGRGGRSGGFGGRSGATRDFRRGGGGFGGSSGFG
GGFGGGSSYGGSNDFGSARSSGYSSNYGNQNQSTSWW
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgactgacttagcacaggatatgaacaagctttctgtcaacggagacgctcgcaacggc
gcctctgctactcagaacggagctccagctaatggtggtgctaacggttctgctgaccag
ccccagaagcgtcagtacgttccacctcatttgagaaatagaccccagggccaaaccaga
agcgactttggtggctcgggaagcaacggacgtggtagctcgagtggccgtggattcgcc
tttggcggatctggtagctatggaggcggccgccgtggtggtggatatggctctgcttcc
agagcaccaaacccacgttctggtcaaggacgttgggttgacggcaagcatgagcctctg
cctcgtaacgagagaatcgagctcgagttatttggctctgctgaggaatcaggttctctg
acttctggtatcaactttgacaactacgatgacatcccagtggaggcatcgggtgacgat
gtccctgacgccattacttctttcactgctcctcctttggacgagcttatggtggagaac
atcactttgtcgagattcactaagccaaccccagtgcaaaaatactccatgcctattgtt
gccaagggtagagacttgatggcttgtgctcagactggttccggtaagaccggtggtttc
ttgttcccagtattgtctgaatgtttcaagaatggccctcttcctgttccagacactgct
ggccccttctcttacaacaaggtgtacccaacggtgttgatcatggcaccaaccagagaa
ttggtctcccagatttttgaggaggcgaagaagttttgttacagatcgtgggtccgtcca
gccgtggcttacggtggtgtagacattggtcaacagatgaggacattgcaaagaggctgt
gacttgttggttgctgctccaggtcgtttgactgatatgttggagagaaaccgtgtctct
ttggccaacgttaagtatttgattttggacgaagcagacagaatgttggatatgggtttc
gagcctcagatcagacacatcgttcaagagtgtgacatgccagatgttcaggacagacaa
acgttgatgttctcagctactttcccaagaaatattcagatgttggccagagacttcttg
aaggagtacattttcttgtccgttggtagagttggttctacatcagctaacatcactcaa
aaagttttgctcgtcgaagacgatgagaagagatctgtcattttggacttgttgtccgct
gccgaccttggcttgaccattgttttcacagagacaaagaggatggctgactacttggct
gacttcttgtatgaccaaggttttcccgccactgccatccacggtaatagaacgcaatac
gagagagagaaggctctcgctgcttttaagaacggtactgctccaatcttggttgccact
gcagtcgccgccagaggtttggatatccccaatgttcagcacgttatcaactatgacttg
cccacggacattgatgattacgttcatagaatcggtcgtaccggtcgtgctggtaacgtt
ggtatcgccacttctttcttcaacagaaacaacaagatcattgttaaagacatgatctct
cttttgaccgaagctagccaagaggttcctgatttcctcatcaagatctctagagagtcc
tcctacggtggccgtggtggcggccgtggtggtcgcagcggcggctttggcggcagatct
ggtgctaccagagatttcagaagaggtggcggtggtttcggcggcagcagcggcttcggt
gggggcttcggtggcggctccagctacggtggtagcaacgattttggcagcgccaggtcc
tcgggatactcttccaactacggcaaccagaaccagagcacttcttggtggtaa
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