Candidozyma auris: CJI96_0003218
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Entry
CJI96_0003218 CDS
T04850
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
caur
Candidozyma auris
Pathway
caur03030
DNA replication
caur03410
Base excision repair
caur03420
Nucleotide excision repair
caur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJI96_0003218
03410 Base excision repair
CJI96_0003218
03420 Nucleotide excision repair
CJI96_0003218
03430 Mismatch repair
CJI96_0003218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caur03032
]
CJI96_0003218
03400 DNA repair and recombination proteins [BR:
caur03400
]
CJI96_0003218
DNA replication proteins [BR:
caur03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CJI96_0003218
DNA repair and recombination proteins [BR:
caur03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CJI96_0003218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_16
RuvB_N
AAA_22
nSTAND3
AAA_14
RNA_helicase
AAA_18
AAA_17
PTCB-BRCT
AAA_33
AAA_29
NPHP3_N
AAA_assoc_2
AAA_28
NTPase_1
Motif
Other DBs
NCBI-GeneID:
40026045
NCBI-ProteinID:
XP_028893272
LinkDB
All DBs
Position
3:complement(join(1295511..1298264,1298316..1298357))
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AA seq
931 aa
AA seq
DB search
MVDIRQFFGGDKKPAPKKRLASERSSEAAPKRSKVAPETKSKYFENDRSKTPKSTGSSAK
SSPKKETKTSPKKASPKKKAKPTYVNLDSDASDSEDEFKPDEDEDDDEDDDFEGKDEDEE
EQDEHELEDDDELSIQEIVPEPKTARQKRKRSESPPATPKKAPKKKPIAPVKTESSETLS
GPNAEEILAQIPNAELPDDVETGGKINYFQLKNKQQNVAPPSGNIELPEAAPNCLGGLTV
VFTGVLPNLDRDSAEAVAKQYGARVTKSISKKTSLVVIGEEAGPSKVKKIKELGIKAISE
DGFVQLLGKMPAEGGSGAGALDAKLKREEEERRLAEEAAEAEEKEKAEEERRKRKAAELA
KAARSQGRAPPSPKREIPNSEKLWTVKYAPTSLSQICGNKGQVKKLRDWLANWHTYAKQD
FKKVGDGGGMFRACLISGPPGIGKTTAASLVAKELGYDILEKNASDVRSKSLLNSTIKNV
LSNTSVMGYFINRDAEEHSENERKFCLIMDEVDGMSSGDHGGAGALSAFCRITKMPIILI
CNDKSLPKMRTFDKTTYQLPFRRPTEMEVRSRLMTIALREGIKLDPSVIGQLVQATGNDI
RQMINMLSTVSKTQKHINHENTKAIADSWKKHTALKPFAITSELLGHGGHKTLNDKIELY
FNDIDFTPLMIQENYLSPTPSVSSAKEHLARVAEAADSISESDRINSLIRSSEQQWSLLP
FHAVMSTVKPASLVQGRLTQMPMFTLWLGQNSKALKYQRLLQELQYHTRLRTSTSKDELR
LDYVPAFEERLAKPMLQRNEEGISEVMEVMDYYYMTKEDYDNIFDFGVGNNAGKLLSRMP
PKVKSAFTRKYNAAQHPVAIYKTGDSTRGQPRKQQVDYEDVIEDDTVKDEEEPESTESDT
IDVKKDKLIKAVKPKKPKAAGSSKKASRSKK
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggtagatatccgccaattcttcggcggcgacaagaagccagctcccaaaaagagactc
gcttcagaaagatcctcagaggcagcgcctaaaaggagcaaggttgcaccagaaacaaaa
agcaagtacttcgagaatgacagactgaagacacccaaatctacggggagctcagcgaag
agttcgcccaagaaagagaccaagacatcaccaaagaaggcgtcccctaaaaagaaggcc
aaaccaacgtatgtgaatctcgattcggacgcttcggactctgaagacgaattcaagcct
gatgaagacgaggatgacgatgaggatgatgactttgaaggcaaggacgaggatgaggag
gagcaggatgagcacgaacttgaagatgacgacgagctcagcatacaagagattgtccct
gaacccaaaacagcgagacaaaagcgtaagagatcagaatcccctccagcaactcctaaa
aaagcacccaaaaagaagcctatagcaccagtcaagacagagtcttcggaaactctttca
ggccctaacgcagaggaaatattggcccagatcccaaacgctgaattgcctgatgatgtg
gagaccggcggtaagatcaattacttccaattgaagaacaagcaacagaatgtggctccg
ccaagtgggaacattgagctcccagaggcggcacctaattgtttgggcggcttgactgta
gttttcactggtgtgttgccaaatcttgatagagactctgccgaggccgtggccaaacag
tacggtgctcgtgtcaccaagtctattctgaaaaagacaagccttgtggtgattggagag
gaggcaggtccctctaaagtaaagaagatcaaggagcttggcatcaaggccatttctgag
gatggctttgtgcagcttttgggcaagatgcccgctgaaggaggaagtggcgccggcgca
ttggacgcaaaattgaagcgtgaagaagaagagcgtagactcgccgaggaggctgcagag
gcagaggaaaaagaaaaggcagaagaggaacgcagaaaaaggaaggctgctgaattagcc
aaggcggctagatcacaaggcagagccccaccttcacccaagcgagagattcccaacagc
gagaagttgtggactgtcaagtacgcacctacaagtctcagtcaaatttgcggtaacaaa
ggccaggtgaagaagcttcgtgattggctcgcaaactggcacacgtatgcaaagcaagac
ttcaaaaaagttggagacggcggtggaatgttcagggcctgtctaatctcaggtcccccg
ggaatcggtaaaacaactgctgcttcattggttgcaaaagagcttggttacgacattctc
gaaaagaatgcgtccgatgtgaggtccaagtcattgcttaacctgacaatcaagaatgtg
ctctctaacacctctgtcatgggttacttcataaacagagatgccgaagagcacagtgag
aacgagagaaaattttgtctaatcatggacgaagttgacggtatgtccagtggagaccat
ggcggcgccggtgctctttctgccttttgtcgtatcaccaaaatgcctattattctcatt
tgcaatgacaaatcgcttccgaaaatgagaacgttcgacaagacgacttatcaattgcca
ttcagaagaccaacggaaatggaggttagatctagattgatgacaatcgcattgagagaa
ggtatcaagttagatcctagtgtaatcggtcaattagttcaggcaaccggcaatgatatt
cgtcagatgatcaatatgttgtcaaccgtatcaaaaactcagaagcacattaaccacgaa
aataccaaagccattgcagacagctggaaaaagcacaccgcgctcaaaccatttgccatt
acatctgagcttttgggtcacggcggtcataagacactcaatgataaaattgagttatac
ttcaatgatatcgacttcacaccattaatgattcaagaaaattatttgtcccccacacca
ctggtttcatcagcaaaggagcatttggcaagagtggccgaagcggccgatagcatcagc
gaatctgaccgcatcaactcgctcattcgctccagtgagcagcagtggagcttgcttcca
ttccatgcggtgatgtctacagtcaagcctgcaagcttagtacagggccgtttgacccaa
atgcctatgttcacgctttggcttggacagaactcgaaggcattgaaataccagcgcctt
cttcaggaattgcaataccacactcgtttgagaacatccacaagcaaagacgagcttcgg
cttgactacgttcctgcgtttgaagagcgtcttgcaaagcctatgcttcaacgtaacgag
gaaggtattagtgaggtgatggaagtcatggactactactacatgactaaagaggactac
gacaacattttcgactttggagtaggcaacaatgccggcaaacttctcctgagaatgcca
cctaaagtcaagtctgcattcactcgtaagtacaatgcagcacagcaccctgtggccatt
tacaagacgggagactcgacaaggggtcaaccacgcaagcagcaggtggactatgaagat
gttattgaagacgacactgtcaaggatgaggaagagccagaaagtaccgaaagtgatacg
atcgatgtaaagaaggacaagctcattaaggcagtgaaaccaaagaaacctaaggcggcc
ggaagcagcaagaaggctctgcgcagcaagaagtaa
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