Candidozyma auris: CJI96_0003225
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Entry
CJI96_0003225 CDS
T04850
Name
(RefSeq) mRNA_3'-end-processing_protein_YTH1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
caur
Candidozyma auris
Pathway
caur03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CJI96_0003225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caur03021
]
CJI96_0003225
03019 Messenger RNA biogenesis [BR:
caur03019
]
CJI96_0003225
Transcription machinery [BR:
caur03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CJI96_0003225
Messenger RNA biogenesis [BR:
caur03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CJI96_0003225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
40026038
NCBI-ProteinID:
XP_028893265
LinkDB
All DBs
Position
3:1310584..1311234
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AA seq
216 aa
AA seq
DB search
MLRLDPIIHPDTRNKRFKFEDFLRSEYSFGLDPDRPVCQFYRPSQPSSCPNGPLCPNKHV
PAMYNNKIVCKHWLRGLCKKNDHCEFLHEYNLRKMPECLFYSKNGYCTQTQECLYLHIDP
QQKIPECQAYEQGFCPEGPKCPNRHVRKIMCPMYLTGFCPKGYECDYSHPRYDPNIIKES
KVKKLIKGETRELEKISYDQPITDVVRTTESPAPAS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgactcgaccctatcatccaccctgacacgagaaacaagagattcaagtttgag
gatttccttcgcagtgagtactctttcggtctagatcccgacagacccgtgtgtcagttc
taccgacccagccaaccttcgtcatgtcccaatggacctctatgtcccaacaagcatgtt
cctgctatgtacaacaacaaaatcgtgtgcaaacattggcttcgagggctttgtaagaaa
aatgatcactgtgagtttcttcacgagtacaacttgagaaagatgcccgagtgtctcttc
tactcgaagaacgggtattgtactcagacacaagagtgtttatatttgcatatcgatcct
cagcagaagatccctgagtgccaggcgtacgaacagggcttctgtcctgagggtcccaag
tgtccaaacagacatgttaggaaaatcatgtgcccgatgtatttgactggcttttgccct
aagggctacgaatgtgactatagtcatcctcggtacgatccaaacatcatcaaggaaagt
aaagtaaagaagctaatcaagggtgagacaagagagcttgaaaagatatcttatgatcag
cctattactgatgtggtgagaacaactgagtcccctgctccagcaagctaa
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integrated database retrieval system
