KEGG   Candidozyma auris: CJI96_0003838
Entry
CJI96_0003838     CDS       T04850                                 
Name
(RefSeq) hypothetical_protein
  KO
K12880  THO complex subunit 3
Organism
caur  Candidozyma auris
Pathway
caur03013  Nucleocytoplasmic transport
caur03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:caur00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CJI96_0003838
  09122 Translation
   03013 Nucleocytoplasmic transport
    CJI96_0003838
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:caur03019]
    CJI96_0003838
   03041 Spliceosome [BR:caur03041]
    CJI96_0003838
Messenger RNA biogenesis [BR:caur03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     CJI96_0003838
Spliceosome [BR:caur03041]
 Complex C
  Other components
   EJC/TREX
    CJI96_0003838
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    CJI96_0003838
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 WDR55 ANAPC4_WD40 Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_RIG_2nd eIF2A Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_NUP159_NUP214 Beta-prop_WDR36-Utp21_2nd Beta-prop_VPS8 Tricorn_2nd WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_LRRK2 WD40_like Beta-prop_NOL10_N KNTC1_N Beta-prop_Vps41 Beta-prop_DCAF12 Beta-prop_RSE1_2nd CFAP43_N DUF7099 Utp8_b_propeller NBCH_WD40 Beta-prop_IFT140_1st Cytochrom_D1 Beta-prop_RSE1_1st
Other DBs
NCBI-GeneID: 40030277
NCBI-ProteinID: XP_028888131
LinkDB
Position
4:342236..343192
AA seq 318 aa
MAAIFANIRQQQVNDTNPNGRQCQYDILHISTNAIGTKIANTRDDKAIRIWKLVASGPTD
CVLIPSGHAEPVKRISWLPTSDNRFASVGGDGYLKLWTSAGTLEREIRVSTERTENKFRL
VDYSVDGSYLSLTNEDTLVIVDVNDGYKKVHEMQFSDAISEVKWSNDPHTLLVGLVNGCI
NFLQLKENLEVVYTLSGPRSAVNCIAIDPKGRFICAGNEDGIVFFYNTADLQNSKTITKV
DESITSLDIIKDGNYVAVGYEKDCNIHIYECGTLEKIHEIKDPSCKVLKLPLFKWLPTVN
GYIYTSNQNRSMNVARKA
NT seq 957 nt   +upstreamnt  +downstreamnt
atggcagcaatctttgctaatatacggcagcaacaagtcaatgacacaaatccgaatggg
agacaatgccaatatgacatacttcatatctctaccaacgcaattggcacaaagatcgcc
aatacaagggacgacaaggcgataagaatatggaagctagtggccctgggacccacagat
tgcgtccttatccccagtgggcacgcagaaccagtgaaacgaatatcatggctcccaact
tcggacaatcgctttgccagtgtgggtggtgatggttacctcaagctttggacactggcg
ggaactctagaaagagagatacgcgtttctactgagagaaccgagaacaagttccgcttg
gtagactattctgttgatggactgtacttgtcgctaacaaatgaggatactcttgtcata
gtagatgtgaacgatggctacaagaaagtacatgagatgcagttttcggacgctatatcg
gaagtgaaatggctgaatgatccgcatacgcttctagtcgggcttgtgaacgggtgtatc
aatttcttacaacttaaagaaaatctcgaggtagtttacacgctatcggggcctcgttcg
gctgttaattgcatagctatagaccctaaaggaaggtttatctgcgctggaaatgaagat
ggcatcgttttcttttacaatacagcagacttgcaaaacagcaagaccattacaaaagtt
gatgagtccataacatctctcgacataatcaaggatggaaattacgtcgcggtgggctat
gaaaaggactgcaatatccacatttatgaatgtggaactctagagaagattcatgagatc
aaagacccttcgtgtaaggttttgaaattgcctcttttcaagtggttaccaacagttaac
ggctacatatacaccagcaatcagaatcgcctgatgaacgttgctaggaaagcatag

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