Candidozyma auris: CJI96_0004097
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Entry
CJI96_0004097 CDS
T04850
Name
(RefSeq) mismatch repair ATPase MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
caur
Candidozyma auris
Pathway
caur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CJI96_0004097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caur03400
]
CJI96_0004097
DNA repair and recombination proteins [BR:
caur03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CJI96_0004097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
SH2_2
DUF7222
Motif
Other DBs
NCBI-GeneID:
40030539
NCBI-ProteinID:
XP_028888385
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Position
4:complement(901846..904815)
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AA seq
989 aa
AA seq
DB search
MSSTRPDLKFTDTVDERSFYRRFANLPEKEANTVRIVDHKDYFTALEDDAELIADAIYKT
SSVIKTSNSKHRYVTISPQVFTSVVRFCLVENNYKVEVYSKQFQLLATATPGNLESLAVE
YGIDVESMLRDASTPVVASVKFTTSGAGKKVGVCLADLSNKALRLSEFEDNDLFSNLESL
FLQVNVKEVVLPSSYTPDDDAPGDVVKLFQVLNKIGSVVISSIKSSAYTAKDIDQDLAKI
VSAENIDSEAANNVELVLASKGINSSEYTLSLGCCNSLIQYLNLLGGDSASFTIDKYNLN
TYMKLDSSTMRALNIFPSTQTMPGPKPSNVSSIFDLLNKCKTASGTRLLSQWLKQPLTDL
DAISDRHALVGHLINDTNLRVFVSQEWLTQVPDVKRLLKKIANGMKRVTGAENKKLEDVV
RLYQLVTILPELINMVQMSLDDATEQLKPLMQREWLDPLSKNHASLVKFQELVETTIDLS
PLESSSSSDLYTDFNIKPEFDESLITINDNLQSTISKIKQVHEQVADDLNIDIEKKLKLE
NHQQHGWCFRVTRIDSAILRNTGDNYIELQTVKAGVFFTTRKLRKLSEQYAEYSDEYNSK
QKELIKEILSITLTYQTVFLRLSLVLSHIDVIASFANVAIFAPTPFMKPNLHPLAGSTTS
EEFLSRRINLKDARHPVLELQEDVNFIANDVNLGNADNDKSFVIITGPNMGGKSTYIRQV
GVIALMCQVGSYIPASEDGAPPEVPIFDAILSRVGAGDSQLKGLSTFMIEMLETSSILAT
ATHNSLIIIDELGRGTSTYDGFGLAWSISEHLISVKKCFTLFATHFHELTKLSEKYEGRV
QNLHVVAHIEKKGAEEVEDDDITLMYRVEPGISDKSFGIHVAELVKFPTKIINMAKRKAS
ELQSLNAGSDADPYVSNKRTKCSNEEISAGVEKLKTILLSWKDECIDPETQKCKVSSEEA
ISSLKKLVDGRYSEESKNDKFIQEVLTML
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcacaagacccgacttgaaattcacagacaccgttgacgaacgactgttctac
cggcgctttgccaatttgcccgaaaaagaagccaacaccgttcgaattgtcgaccacaag
gactacttcacggctctagaagatgatgcagaactcattgctgatgctatctacaaaacg
ctgctggtgatcaagacgtccaactcgaagcaccgttacgtgacgatttcaccccaggtt
ttcacgtcggtggtgagattttgcctagtggaaaataattacaaggtggaggtgtatctg
aagcagttccagctactagcgacggctacacccggtaatctcgagctgcttgctgtggag
tatggaattgatgtggaatccatgcttcgggatgcgctgactcccgtggttgctagcgtg
aaattcaccacctctggcgcaggaaaaaaggtgggagtatgtttggcagatttgctgaac
aaggcgttgcggttgctggagttcgaggataacgacttgttttcgaacttggagctgttg
ttcttgcaagtgaacgtcaaggaagttgtgttgccaagctcatacactccagacgacgat
gctcctggagacgtggtgaagctcttccaagtgctcaacaagatcggctcagtggtgatc
tcctccatcaagctgagcgcttacacagccaaagacatcgaccaagatttggcaaagatc
gtctcggccgaaaacatagacagtgaggctgccaacaatgtcgagctcgtgcttgcttcc
aaaggtatcaactcttccgagtacaccctctcattgggctgctgcaactctcttatccag
tacttaaacttgcttggaggcgactcggcttctttcaccattgataagtacaacctcaac
acctatatgaagctcgactcctcgacaatgagagcgctaaacatcttcccctccactcag
accatgccaggccccaaaccgtcaaatgtgtcgtcgatctttgatcttttgaacaagtgc
aagactgcttccggcacacgcttgctttcccaatggctcaagcagccgctcacggacttg
gatgccatttctgatcgtcacgcattggtgggacacctcatcaacgataccaatcttcgt
gtgtttgtctcgcaagaatggttaacgcaagttcccgatgtgaagcgacttctcaagaaa
atcgccaacggcatgaagagggtcacaggggccgagaataaaaaattggaggacgtagtg
aggctctaccagcttgtaacgattcttcctgagctcataaacatggtgcagatgtctttg
gatgacgctactgagcaactcaaacctctcatgcaaagggagtggttggatccactttca
aagaaccacgcttcactcgtgaagtttcaggagttggtagaaacgacaatcgacctttct
ccccttgaatcatcctcgtccagtgacctttacacggatttcaacatcaagcctgaattt
gatgagctgctcatcactatcaacgacaaccttcagagcaccattctgaagattaagcaa
gttcatgaacaggttgcagacgatctcaatatcgatattgaaaagaagctcaagcttgaa
aatcatcaacaacacgggtggtgttttagagtcacacgtatcgactcggccatcttgaga
aacaccggtgataattacatcgagctccagactgtgaaggcaggcgttttcttcacaact
agaaagcttcgtaagctttctgaacaatacgcagagtattctgatgagtacaactcgaag
cagaaggaattgatcaaggagatcttgtccattacgttgacgtatcaaactgttttcttg
agactttcgctcgtgttgagccacattgatgtcattgcatcttttgccaatgttgccatt
tttgcaccaacgcctttcatgaagcccaatttgcatccattggcagggtcaacaacttca
gaagagttcctatccagaagaatcaatttgaaggatgcaagacatcctgttcttgaatta
caagaagacgtaaactttattgccaatgacgtcaatttgggtaatgccgataatgacaaa
tcttttgtgatcatcactggtccaaatatgggaggtaagtccacatacattcgtcaggtt
ggtgtcattgcgctcatgtgtcaagtgggctcgtatatcccagcatcagaagatggtgcg
cctccagaagtgccgatctttgacgcaatattgtctcgtgtgggtgctggtgattcccag
ctcaagggtttgtctacctttatgatcgaaatgctagaaacttcatcgattcttgctacc
gctacacacaactctctaattatcatcgacgaattgggccgcggtaccagtacctatgat
gggtttggcttagcatggtccatatctgagcatctaattagtgttaagaagtgcttcacg
ctctttgctacgcattttcatgagcttaccaaattgtcagagaagtatgagggtagagta
caaaatctacatgtggtcgcccacatcgagaagaaaggtgccgaggaagtcgaggatgac
gatatcacgttgatgtacagggtagagcctggaatttctgacaagtccttcggtattcat
gttgctgagctcgtgaaattcccaacgaagatcatcaatatggccaaacgcaaggcctca
gagctccaaagtttaaatgcgggatccgatgctgatccatacgtgagcaataaaaggacg
aaatgcagcaatgaggagatcagcgctggtgttgagaagctcaagacgatcttgctttcg
tggaaagatgaatgcatcgaccctgaaacacagaaatgcaaggtttcttctgaggaggcc
atactgtcattgaaaaagcttgtggatggccgctacagcgaagagctgaagaacgataag
ttcattcaagaggttctcaccatgttgtaa
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