Candidozyma auris: CJI96_0004370
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Entry
CJI96_0004370 CDS
T04850
Name
(RefSeq) mRNA splicing protein SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
caur
Candidozyma auris
Pathway
caur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CJI96_0004370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caur03019
]
CJI96_0004370
03041 Spliceosome [BR:
caur03041
]
CJI96_0004370
Messenger RNA biogenesis [BR:
caur03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
CJI96_0004370
Spliceosome [BR:
caur03041
]
Complex B
Other components
Prp19-related factors
CJI96_0004370
Complex C
CJI96_0004370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_PRP39_N
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
TPR_14
Suf
Motif
Other DBs
NCBI-GeneID:
40029813
NCBI-ProteinID:
XP_028888719
LinkDB
All DBs
Position
5:229624..231099
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AA seq
491 aa
AA seq
DB search
MGEYELENRLDIFEDLLRKRPFLINDVRLKSSPNNVDLWLERASIYDNDHGGRIKALVDA
LMNINPLHATGQKSLVSIWEEYAKIYLDSGDVNTAILIYSKAAKSQFKDASELASVHIMW
TEALLNVSDEAALEHIEDVLYNHIPPNFKQVKFHISSMPVQARVFKSVDLWKFYIDLLKA
VLDEKNLEVINNKMHTAYQKMMHLEVITLRLIFDYASFLKQQNMLDRAFSLYEEALRAFQ
APMAQYELWKAYLEDTILQKSANENRIRDLLEQCLSGVPLPGHLVKNIFDMYIDFEERNQ
MPIKTLKLLERAIAYLGQAIQGPVMDYSKQELNKIVDDKYVFQLQLLTRIAQVKDHQLLR
SAYETAVQDLHYSMPQILDLGLRFIEFETLQKEIVRARSLFKHFTSLGSPESLLFAKVWA
AWEKFESEHGSEELIQDMFSYRRKLSRVFADIAQAKSEVNPMGFVKGETKGGEIKPKHVE
NPDAIDLDMDM
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaatacgaactcgaaaatcgcctcgatatcttcgaagaccttctcagaaagcgg
ccttttctcatcaatgacgtgagactcaaaagcagtccaaacaacgtcgatctctggctc
gaacgtgcatcaatatacgacaatgaccacggtggcagaatcaaagctctagtggacgct
ctcatgaatatcaatccgctacatgcaacgggacaaaagagcttggtgagtatatgggag
gaatacgcaaagatatatctagacctgggtgacgtgaacactgcgattttgatttattcc
aaagcggccaaatctcagttcaaagatgccctggaacttgcgtctgtccatatcatgtgg
acagaagcgctcttaaatgtttctgacgaggcagctcttgaacacatcgaggatgtctta
tacaatcatatacctcccaacttcaagcaggtgaagtttcacatctcctctatgcctgtc
caagcaagagtgttcaaatctgtcgatttatggaaattttatatcgacctactaaaagct
gtcttggatgagaagaatctcgaggtgataaacaacaaaatgcacacggcgtatcagaaa
atgatgcatctagaagtgattactctacgacttatctttgattatgcttcatttttgaag
cagcaaaacatgctagaccgtgcattctctttgtacgaggaggcgcttcgtgcttttcaa
gccccaatggcccaatatgaactttggaaagcatacttggaagatactatactacaaaag
ctggccaatgaaaaccgaatccgtgatcttttggagcagtgcttgctgggcgtgccattg
ccgggccatcttgtaaaaaacatattcgatatgtacattgacttcgaagaaaggaaccaa
atgcctataaaaacactcaagttgcttgaaagagcaattgcttaccttggacaggctatc
caaggtcctgttatggactactcaaaacaggaactcaacaagattgtggacgacaaatac
gtcttccaacttcagcttttgaccaggattgcgcaggtgaaggaccaccagcttttaaga
agtgcttacgaaacagcagttcaggatttgcactactcaatgccgcaaattctcgactta
ggactccgttttatcgagtttgagacacttcagaaggaaattgtgagagcaagatctctt
ttcaaacacttcactctgttgggaagtccggaatcacttctttttgctaaagtttgggcc
gcctgggaaaagtttgaatctgaacatgggtccgaagaactaattcaagatatgtttagt
tacagaagaaagctctcgagagtttttgctgacattgctcaagctaagagcgaggtaaat
cctatgggatttgtgaagggagagaccaagggaggagagatcaagcccaagcatgtcgag
aatcccgacgccatcgatttagacatggacatgtga
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