KEGG   Candidozyma auris: CJI96_0004370
Entry
CJI96_0004370     CDS       T04850                                 
Name
(RefSeq) mRNA splicing protein SYF1
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
caur  Candidozyma auris
Pathway
caur03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:caur00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CJI96_0004370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:caur03019]
    CJI96_0004370
   03041 Spliceosome [BR:caur03041]
    CJI96_0004370
Messenger RNA biogenesis [BR:caur03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     CJI96_0004370
Spliceosome [BR:caur03041]
 Complex B
  Other components
   Prp19-related factors
    CJI96_0004370
 Complex C
    CJI96_0004370
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_PRP39_N HAT_Syf1_M HAT_Syf1_CNRKL1_N TPR_14 Suf
Other DBs
NCBI-GeneID: 40029813
NCBI-ProteinID: XP_028888719
LinkDB
Position
5:229624..231099
AA seq 491 aa
MGEYELENRLDIFEDLLRKRPFLINDVRLKSSPNNVDLWLERASIYDNDHGGRIKALVDA
LMNINPLHATGQKSLVSIWEEYAKIYLDSGDVNTAILIYSKAAKSQFKDASELASVHIMW
TEALLNVSDEAALEHIEDVLYNHIPPNFKQVKFHISSMPVQARVFKSVDLWKFYIDLLKA
VLDEKNLEVINNKMHTAYQKMMHLEVITLRLIFDYASFLKQQNMLDRAFSLYEEALRAFQ
APMAQYELWKAYLEDTILQKSANENRIRDLLEQCLSGVPLPGHLVKNIFDMYIDFEERNQ
MPIKTLKLLERAIAYLGQAIQGPVMDYSKQELNKIVDDKYVFQLQLLTRIAQVKDHQLLR
SAYETAVQDLHYSMPQILDLGLRFIEFETLQKEIVRARSLFKHFTSLGSPESLLFAKVWA
AWEKFESEHGSEELIQDMFSYRRKLSRVFADIAQAKSEVNPMGFVKGETKGGEIKPKHVE
NPDAIDLDMDM
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgggcgaatacgaactcgaaaatcgcctcgatatcttcgaagaccttctcagaaagcgg
ccttttctcatcaatgacgtgagactcaaaagcagtccaaacaacgtcgatctctggctc
gaacgtgcatcaatatacgacaatgaccacggtggcagaatcaaagctctagtggacgct
ctcatgaatatcaatccgctacatgcaacgggacaaaagagcttggtgagtatatgggag
gaatacgcaaagatatatctagacctgggtgacgtgaacactgcgattttgatttattcc
aaagcggccaaatctcagttcaaagatgccctggaacttgcgtctgtccatatcatgtgg
acagaagcgctcttaaatgtttctgacgaggcagctcttgaacacatcgaggatgtctta
tacaatcatatacctcccaacttcaagcaggtgaagtttcacatctcctctatgcctgtc
caagcaagagtgttcaaatctgtcgatttatggaaattttatatcgacctactaaaagct
gtcttggatgagaagaatctcgaggtgataaacaacaaaatgcacacggcgtatcagaaa
atgatgcatctagaagtgattactctacgacttatctttgattatgcttcatttttgaag
cagcaaaacatgctagaccgtgcattctctttgtacgaggaggcgcttcgtgcttttcaa
gccccaatggcccaatatgaactttggaaagcatacttggaagatactatactacaaaag
ctggccaatgaaaaccgaatccgtgatcttttggagcagtgcttgctgggcgtgccattg
ccgggccatcttgtaaaaaacatattcgatatgtacattgacttcgaagaaaggaaccaa
atgcctataaaaacactcaagttgcttgaaagagcaattgcttaccttggacaggctatc
caaggtcctgttatggactactcaaaacaggaactcaacaagattgtggacgacaaatac
gtcttccaacttcagcttttgaccaggattgcgcaggtgaaggaccaccagcttttaaga
agtgcttacgaaacagcagttcaggatttgcactactcaatgccgcaaattctcgactta
ggactccgttttatcgagtttgagacacttcagaaggaaattgtgagagcaagatctctt
ttcaaacacttcactctgttgggaagtccggaatcacttctttttgctaaagtttgggcc
gcctgggaaaagtttgaatctgaacatgggtccgaagaactaattcaagatatgtttagt
tacagaagaaagctctcgagagtttttgctgacattgctcaagctaagagcgaggtaaat
cctatgggatttgtgaagggagagaccaagggaggagagatcaagcccaagcatgtcgag
aatcccgacgccatcgatttagacatggacatgtga

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