KEGG   Candidozyma auris: CJI96_0004436
Entry
CJI96_0004436     CDS       T04850                                 
Name
(RefSeq) exosome non-catalytic core subunit RRP4
  KO
K03679  exosome complex component RRP4
Organism
caur  Candidozyma auris
Pathway
caur03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:caur00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CJI96_0004436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:caur03019]
    CJI96_0004436
Messenger RNA biogenesis [BR:caur03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     CJI96_0004436
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     CJI96_0004436
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 ECR1_N_2 RRP40_S1 DUF2110
Other DBs
NCBI-GeneID: 40029880
NCBI-ProteinID: XP_028888785
LinkDB
Position
5:complement(378649..379737)
AA seq 362 aa
MSDAVITISRPSRDDLSLDLNSEADMDSETDTTAKFESQEDRLSTSNRKAVSSVVTPGEL
ITNDPIWMKGHGVYFLDNMTYSAVAGNIARVNRLLSVIPLRGRYEPETGDHVVGRITEVG
QKRWKVDIGAKQDAVLMLGSVNLPGGILRRKSENDELQMRTFLKEGDLLNAEVQTIFNNG
LASLHTRSLKYGKLRNGVFLKVPSSLIIKQKNHSFDMPGSVSIVIGMNGFIWLSKTLQSG
FSKTESGGGKLPLASTDSYTPGQGGVAITKLEEGSSWEIYSDRNDPSINETSRNTISRYY
NVIKALAACELGITEPRIRMGYEGSMMYSDSGSLIEREAQESICQDILENERMRGSGDPH
ID
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgctggacgcggtgattaccatttctcgacctctgagagatgatctttctcttgatttg
aactcagaagctgacatggactcggaaacagataccactgcaaagtttgagtcgcaagaa
gaccggctctcaacaagcaatcgcaaggctgtgtcctctgtggtaacccccggtgaatta
ataacgaatgatcccatttggatgaagggacacggtgtttactttttggataacatgact
tattctgctgttgcagggaatattgctcgggtgaatcggcttttgagcgtcattccattg
cgtggtagatatgaacccgagacaggagatcacgtagtcggccgaatcacagaagtgggt
cagaaaaggtggaaagttgatataggtgcaaaacaggatgctgtgttgatgctcggatca
gtaaatttaccgggtggcatattgagaagaaaatctgaaaatgacgaattgcagatgagg
accttcttgaaggaaggtgatttgctcaatgcagaagtgcaaactatattcaacaacgga
ttagcatcattacatacaagatcgctaaagtatgggaagttgagaaatggagtattttta
aaggtaccttccagtttgatcatcaagcagaagaatcactcatttgatatgccaggaagc
gtaagcatagtgattggcatgaacgggtttatatggttgagcaagactttgcagtcaggg
ttttcgaagacggaatccggaggcggcaaattgcccttagcttccactgattcctatact
cctggacagggaggtgtggctatcacaaaattagaagaaggctcttcgtgggaaatatac
agcgacagaaacgacccgagtatcaacgaaacttctcgcaatacgatatctcggtactac
aatgtcataaaagcgctagcagcatgtgaacttggcatcaccgaacccagaattagaatg
ggctacgagggaagtatgatgtattcagactctggtagtctcatcgagcgcgaagctcaa
gaaagcatttgtcaggacattcttgaaaatgaaagaatgagaggatcgggagaccctcat
atagattaa

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