Candidozyma auris: CJI96_0004706
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Entry
CJI96_0004706 CDS
T04850
Name
(RefSeq) hypothetical_protein
KO
K14311
nuclear pore complex protein Nup188
Organism
caur
Candidozyma auris
Pathway
caur03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CJI96_0004706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caur03019
]
CJI96_0004706
Messenger RNA biogenesis [BR:
caur03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CJI96_0004706
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_C
DUF5917
Motif
Other DBs
NCBI-GeneID:
40030749
NCBI-ProteinID:
XP_028888588
LinkDB
All DBs
Position
6:complement(46005..50843)
Genome browser
AA seq
1612 aa
AA seq
DB search
MPASKALSHQRGLRPMEQTPSWTFGSALTLLNETPTIHILDALDEFLLHSKEVILSPFPF
RCKDPKDLNMLNEFTLRGVLFEDVSKNVSTANKLARILHVDPKEALRVITQTQQRIPEFE
SANKPSSLLGSRLHDDKDELKTGEKLARYASMLLKERRVVLRIAKNCLGRRYDENSTSTV
RNLGKSIILDSSYAENAIESLRQCATDILSGSYKTGVSHAIDTIVYTETLLFMSELLSLL
CEIIISSSGISPVTQWFRFMDETNFMISLGSFITNKECFVLLQSLATVVSLQVLDLENSF
DTESQSYVNDGKLFKSIDEIISTRNVNSIVNYAWLIILYKKAIVVEEFSEMSVTFVKEFP
LDKINASIAFFTEVLESSNVFLDVTKLNQFLQFDELYSIVLSNLLMVALPLMPMNVDTAT
CIQQVLSSAPPFIVEKFYDNPEVVNAIVLSRAKFPVSIPPYLKLASINGNFAFNEFRELK
SYMSVFDKEEFGRICDIDSENTDLMKLSETVDLYPPYEVNNKLSLMLSYNTKAKVIPTKD
DKVLVTFLYKYSGWAFLGRVIQNISKTFDITDSQKMLVLKDLLHLLVQTSAQVEKEDFVT
ALKAMSAYTDDSDILEILFRLLEQGLHNRNTEISAQVIKILTNLLPVYSPRIWPYLAKSS
LLPNRGKESFMSIMFGSIEMVNGSYDFTNALIKFIGALTNDCLTNKHGFPDNLQGEVLGA
MIEHAIVVFESFINCNFDDGLQRLELGILLVGVFTSILSALNEVNSGNLSQSVPVKELSI
SADKIIRSFLAPEVASVRSPIPIFKMIKSVADTMNYYDFRDVTGIYSKNWIRSALKFSEI
LIITRSLVGLKPSQFERKMFTHLQDLIKIYSRGSFRKSVLDLITALTSGIWNDEPMPSML
SHLEQEYSQIFLRSLAADLTNLFDDYTIRVSVYDLLCSILDANQEGLSVLFISGRNVFGG
SKSETSLSVSLLAILKKNANEMKYYPPSVTAHLLDAIALAFNSWTIANEDNSDEHFVKEI
LKPLESADGDLDDSKASIDLISACYSNKVIAKSAEILSLILFTTKSEAIKALITDGLLHK
DSFVKNIPKFLCPKLQKGPTLQQITSQFEEHFPNYRLSQFTSSSQRRNRFSVNAIYALDI
MESLFFSNGKWAEMKTMLENWSARMQDYYSQVAIAKSVGALITALCRRAPSKKLNSYVKL
IPQILSLQRIEESQIVTTATQLKLERVELAFLVAQTCTVVEGFQDDGQIALDIIEKSSIA
FHGGSCTDENTPTTQRALLRLAHIALSTLRNEQNLIISRFSILRDFFDQVVSQGSRLIIA
QLQNDVYLSRTDKTHKATDLGELLNDLRLVISIFKCFVSFNIPDSLQNELANSLIEQKTV
DSYLSLYSFSHLIVVHDEPIFSHLTLMFVQLLLSVGVFAEKFITRNMFMVIRESVISQPL
REGGITIQNSPQLHRNWTNGIMPIISATLTGPSNKTEVFNTIKAFRKQIGFCIESWAKDS
QTLRVSSAVTWETTQICHFYQILSSIAKAENISSQSPTSVDMYILPGLDTPQRREDFLDY
INNLLKHPKFLSSIIIPSTPEETKVLKTAGKAQDEFVKALISEISELKEFFN
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttccaaagctctttcccaccagcgtggtctcagacccatggagcagacccca
ctgtggacgtttggctccgcattgaccctccttaacgaaacacccacgattcatatacta
gatgccttagatgagttcctcttgcactcaaaagaggtgattctttcgccgtttccattc
cgatgcaaggatccaaaggacttgaacatgctaaatgagttcacccttcgtggtgttttg
tttgaagatgttctgaaaaatgtgtctacagctaataaattagcacgtatcttgcacgtc
gatcccaaggaggcgttgcgtgtgatcactcaaacacagcagagaattcccgagtttgaa
agtgctaataagccatccagcttgttgggctctcgccttcatgacgataaggatgagttg
aagacgggagagaagttggcaaggtatgcatctatgcttctaaaagaaagaagagtagtg
cttcgaatagcaaagaattgtctcggcagaagatacgatgagaactctacatctactgta
cgcaacttgggaaagctgattattctcgattcaagctatgccgaaaatgctatcgagtcg
ctcagacaatgtgcaactgatatccttctgggctcctacaagacgggtgtatctcatgca
atagatactattgtgtacacagagactctactctttatgctggagcttttaagccttttg
tgtgagataattatctcgtctagtggcatctctccggtgacccaatggtttaggttcatg
gatgagacaaacttcatgatctcattgggctcattcatcacaaacaaggaatgctttgtg
ttgcttcaatctctagcgacagttgtgtcattgcaagtactcgacttggaaaatagcttc
gatacagagagccaactgtatgtgaatgacggcaagttgttcaagctgattgacgagatt
atctcaactagaaacgtgaactccatcgttaactatgcttggctcatcattctttataaa
aaggccattgtcgtggaggagttttcggagatgctggtaacattcgtaaaggagttccct
cttgataagattaacgccagcatcgcgttttttacagaagtgctcgaactgagtaatgtt
tttctagacgtcaccaagctcaaccagtttctacagtttgatgagctttattcgattgtt
ttatccaatctactaatggtcgcgttgccacttatgccaatgaatgtcgatactgcgact
tgcatccaacaagtattgagctcagcgccacctttcatagttgaaaaattctatgacaac
cctgaagttgtcaacgccattgttttgtccagggctaaatttcccgtcagcattcctcca
tacctaaaattggcctcaatcaatggcaactttgcattcaatgagttcagggaactcaaa
tcatacatgtcagtgttcgataaagaagagtttggtcgaatttgtgacattgactcagaa
aatactgacctcatgaagctctctgagacagttgacctttatccaccatacgaagtgaat
aacaaattatctcttatgctcagctataataccaaagctaaggtcatacctactaaggat
gataaggttcttgtgacatttttgtataagtacagtggttgggcatttcttggaagagtg
attcaaaacatctcaaagacattcgacatcacagatctgcagaagatgctcgtgctcaaa
gacttgttgcacttgcttgttcagacaagcgctcaagttgagaaggaggatttcgttact
gctcttaaggcaatgtctgcatacacagatgactctgacatacttgagatcctctttagg
ttacttgaacagggtttgcacaaccgcaatacggagattctggcccaagtcataaaaata
ctcaccaacttgttgccagtatactctcccagaatctggccctaccttgctaaatcttca
ttacttcctaacagaggaaaggagctgttcatgtctataatgtttggatctattgaaatg
gtcaacggctcatatgactttacaaatgccttgattaagtttatcggggcgcttaccaat
gactgtttaacgaacaaacatggattccccgacaaccttcagggagaagtacttggtgct
atgattgaacatgcaatcgtggtcttcgaaagctttataaactgcaatttcgatgatggt
ttgcaaagactcgagttgggcattttactagtcggtgtatttactagcattctctcagca
ctcaatgaagtgaattctggcaacttaagccaatctgtgccggtgaaagaacttagcatt
tctgctgacaaaattatcagatcctttttagcaccagaagttgcatcggtacgttccccc
atacctattttcaagatgataaagtcagtcgcagacactatgaactattacgatttccgt
gatgtaaccggaatatactcgaaaaactggattagaagcgccctaaagttttctgaaatt
ttgattattacaagaagtctcgtcggcttgaaaccttcccaatttgagagaaaaatgttt
acacatcttcaagatttaatcaagatctattcgagagggtcgtttagaaagtctgtattg
gacttgattactgccttgactagtggaatctggaacgatgagccaatgccatcaatgttg
tcgcatttggagcaagaatactcgcaaatatttttgcgttccttggctgctgatctcact
aacctatttgatgactacaccataagagtttctgtgtatgaccttttatgctccattttg
gatgctaaccaggagggtctttcagtcttatttataagcggcagaaatgtttttggaggc
tctaagagtgaaacatctttatctgtttcgcttctcgccatccttaaaaagaatgcaaac
gagatgaaatactatcctccatctgtcacagctcacttgctagatgcgatagctttggca
ttcaattcttggacaattgcaaatgaggataatagtgatgagcactttgtcaaagaaatt
ctcaaaccccttgagagtgcggatggtgacctagatgattcgaaagcttctatcgacctc
atttcagcttgttacagcaataaggtcatcgcgaagagtgccgaaatattgtctctcatc
ttgtttacaacaaagagcgaggcgattaaggcgttgatcacagacggtctccttcacaag
gactcgtttgtgaagaatattcccaagtttttgtgtccaaaacttcagaaagggcccacg
ttgcaacaaataaccctgcaatttgaagagcattttcccaattatcgactttctcaattc
acctcttcttctcaacgaagaaacagatttagtgtgaacgccatctatgctcttgatata
atggagagtctttttttctcgaatggcaaatgggcggagatgaaaacaatgttggagaat
tggagtgctcgaatgcaagactactactcacaagttgccattgccaagtctgtcggggct
ttgattacggcattgtgtcgtagagcaccctccaagaagctaaacctgtacgtcaagctt
attcctcaaatactctctttgcaacgtattgaggagctgcaaattgttactacggccacg
cagctcaaattagaaagggttgaattggcttttcttgtcgcccagacgtgcaccgttgtc
gagggttttcaagatgatggccaaattgcgcttgatattatcgagaagtcatcaatagct
tttcatggcggatcatgcacggatgaaaatacaccaactacacaacgtgctttacttagg
ttggcgcatattgccctctctactctcagaaacgagcagaatttgataatctcgagattc
agtattcttcgggacttctttgaccaagtcgtttctcaaggttcgagattaatcatcgcc
caattacaaaatgatgtgtacctctcgaggactgacaagacccacaaggcgacggatctt
ggcgagcttcttaatgacttgcgtttggtgatttcaatttttaagtgtttcgtgtcattt
aacatacccgactcacttcagaatgaattggcgaactcgcttatcgaacaaaagacagtc
gacagttacctcagcttatactcattctcacacttgatagttgttcacgatgagccaatt
ttctcacacttgactcttatgtttgtccagcttcttctatctgttggtgtatttgcggag
aagttcattaccagaaacatgttcatggtgataagagaaagtgttatttcgcagcctctt
cgtgagggagggatcacgattcagaactctcctcaactacatcgcaactggactaatgga
ataatgccaatcatttcggctacattgacgggtccatctaacaagactgaagttttcaat
acaattaaagctttcaggaagcagattgggttttgtatagaaagctgggcaaaagattca
cagacgcttcgtgtctcctctgccgttacttgggagacaacgcagatttgccatttctac
caaatcctcagtctgattgctaaagcagaaaacatctcaagtcaatcccctacatcggtc
gacatgtatattcttccaggtttggacacaccacagaggagagaggacttcttggactac
atcaacaatcttctcaaacatccgaagttcttgtcgtcgatcattattccaagcactcca
gaggagaccaaagtcttgaaaactgctggcaaagcgcaagatgaatttgttaaagcactc
atactggagatatctgagctcaaggaatttttcaactga
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integrated database retrieval system