Candidozyma auris: CJI96_0004743
Help
Entry
CJI96_0004743 CDS
T04850
Name
(RefSeq) U6_snRNA-associated_Sm-like_protein_LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
caur
Candidozyma auris
Pathway
caur03018
RNA degradation
caur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CJI96_0004743
09123 Folding, sorting and degradation
03018 RNA degradation
CJI96_0004743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caur03019
]
CJI96_0004743
03041 Spliceosome [BR:
caur03041
]
CJI96_0004743
Messenger RNA biogenesis [BR:
caur03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CJI96_0004743
mRNA degradation factors
5'-3' decay
Lsm complex
CJI96_0004743
Spliceosome [BR:
caur03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
CJI96_0004743
Complex C
U2 snRNP components
CJI96_0004743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF6090
DUF1461
Motif
Other DBs
NCBI-GeneID:
40030713
NCBI-ProteinID:
XP_028888553
LinkDB
All DBs
Position
6:join(130852..131116,131168..131193)
Genome browser
AA seq
96 aa
AA seq
DB search
MLFFSFFKTLVDQEIILELKNDIEIKGTLRSVDQYLNLKLDNVSTVNENKYPHLKAVKNL
FVRGSTVRYVHMSASAVDCTLLQDASRREAMAQAGK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgctcttttttagtttcttcaagactttggtggaccaggagattatcttggagttgaaa
aacgacatcgagatcaagggtaccttgcgttctgtcgaccagtacttgaacttgaagtta
gacaatgtctcgactgtgaacgagaacaagtacccccacttgaaagccgtgaagaacttg
tttgtgagaggttccacggtgcgttacgtccatatgagtgctagcgctgtcgattgcacg
ttgctacaagatgcgtctagaagagaggccatggctcaggctggcaaataa
DBGET
integrated database retrieval system
