Candidozyma auris: CJI96_0005194
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Entry
CJI96_0005194 CDS
T04850
Name
(RefSeq) MRX complex DNA-binding subunit
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
caur
Candidozyma auris
Pathway
caur03440
Homologous recombination
caur03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CJI96_0005194
03450 Non-homologous end-joining
CJI96_0005194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caur03032
]
CJI96_0005194
03400 DNA repair and recombination proteins [BR:
caur03400
]
CJI96_0005194
DNA replication proteins [BR:
caur03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
CJI96_0005194
DNA repair and recombination proteins [BR:
caur03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
CJI96_0005194
BRCA1-C complex
CJI96_0005194
NHEJ (non-homologous end-joining)
MRX complex
CJI96_0005194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
SbcC_Walker_B
SMC_N
AAA_21
Rad50_zn_hook
ABC_tran_CTD
ABC_tran
AAA_29
AAA_22
AAA_13
Motif
Other DBs
NCBI-GeneID:
40029375
NCBI-ProteinID:
XP_028889089
LinkDB
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Position
7:complement(159228..163121)
Genome browser
AA seq
1297 aa
AA seq
DB search
MSSLYKLSISGVRSFSPKDNEIIQFGTPLTLICGQNGCGKTTIIECLKYATTGDLPPNSK
GGAFVNDPAVADRSIVNAEIKLGFISVDKKSMTVTRNMQLTRKRTGRSATATNTFKTLEG
QLAVHSNGRKTSISSKNAELDTRVPQYLGASKAVLEYVIFCHQEDSLWPLSEASVLKKRF
DEIFEASKFTKVLDNLKIINKEMSTDIKLLEQSVQHANLDKRRAGKIKEKVAESQRKVEQ
LNGEIAELNMEIEALEKQADDLFHSNQSFQKTLSEHERLKMVYETTETNFKRLRSSIELL
RDSDDELRHQLANFSQIQQQRSEAVEEKELLLVDLDAQQSAQQESLSVLTRDEGILFSKK
QAYEERKQQLQELLGELERDYKLSQESVFEELNAFLKQKEDSYENAVAANERKVEEAAAS
VKDAEKLFSREEQHLSYGNDELKSLKAKLKELNAKASASSATEDNITIENAELESLRKKL
ERKKNDDNSIALSETIERDTERHNALEHELDNLMRKLTNANKQADLLSKLDLLKDSLSVK
EEVHAKNIKQNESAFEKVTGKKLDGDFEKSLQETMAETQAEVTEKTTKLNSLKSQMDKLR
ANEESDAASLSKQEKSLATHTSNILNIIEKDEIPQYEELVKETEEDFNTATYNLNTFDVT
KSFKVKAIEIAKQSKCCTLCNRGFSSDELDTFINEVQQNLNTVTASKLQEDVDTTKKDLD
SMNAIRYDVLQYRSLISEVSSCKEQVQKKRAALSEIQQEHDKLEESLDVLRTALDEAAIL
KQPISNIARLKDEIAHIRKQIDEVEQELDSDGGSAMSMAELQKSQQEKSFELKKLRQSIA
SAKDERDVKQKDLARLESQIKDKELRISNLKNSMNELVTLKRSVTETEEKISALEDKQKT
VQKNLKEYERRLHDTTTACNQLKDRCQQEESSMLEELQKIRHKEAQLSDLKQQISSFEVE
DLPKVEHNAAKMKEVRQQIQAFAQQRKTLEKETSTLKDAVNDAVKTRRNIEDNLQYRSTE
RELDAIREQIDQLDVSNAEVEKENYQAASKNLRDKIAELNGQHFGKAGEVKQINDQIQQL
QKELNSEFKDVEKMYHKEWIRLQTNMLVSKDLQTYSSALDNAIMKYHSMKMDQINKILRE
LWNQTYKGTDIDRIEIKCDVNTSGRGRSYNYRVVMYKKSSELDMRGRCSAGQKVLTSILI
RLALAECFGTNCGMIALDEPTTNLDTENAESLATALNTIIDVRKSQKNFQLIVITHDEKF
LSHINGGSYIDNFYRIERDENQYSVIKSLPIHLMQDE
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcctctacaagctctccattctgggtgtcagatccttctctccaaaggacaac
gagatcatccagtttggtacacctttaacgcttatatgtggccagaacggatgtggaaaa
accaccatcatagagtgtctcaaatatgctaccacaggagatttaccgcccaattccaaa
ggtggagcgtttgtcaacgatcctgcagttgctgataggctgatagtgaacgcagaaatc
aaattgggtttcatatctgtcgacaagaagctgatgacagtgacgaggaatatgcagttg
accagaaagagaacagggagactggctacggcaacaaatacgttcaagactctagaaggg
cagcttgctgtccattcaaatggacgaaaaacgtcaatttcgctgaagaatgctgagttg
gacacgcgagttccgcaatacttgggtgcctcgaaagcagtgctagaatatgtgattttc
tgtcaccaggaagacagtttgtggcccttgagcgaagcaagtgtgttgaagaaacggttt
gatgagattttcgaggcgtcaaaattcacgaaggttttggataacttgaagattatcaac
aaggaaatgagcaccgatatcaagcttttggagcaaagcgtgcagcacgcaaacttggat
aagagaagagcaggaaaaatcaaggagaaagtggcagagagccagcgcaaagtggagcag
ctcaacggggagatagccgagttgaacatggagatcgaggcgttggagaaacaagccgac
gatttgttccattccaaccaactgttccagaaaacgctttctgagcacgaaaggctcaag
atggtctatgagaccacagaaacaaacttcaagcggttgcgactgtcgattgagcttttg
cgggattccgacgatgaactacggcatcagttggcgaacttttcgcagatccagcagcag
agaagcgaggccgtggaggaaaaagagcttcttttagtagaccttgatgcgcagcaactg
gcacagcaagagtcgctttctgtgttgactcgtgacgagggtattttgtttagtaaaaag
caggcgtatgaggagcgcaagcagcagctacaagagcttttgggagagctcgagagggac
tacaaactctctcaagagtcggtttttgaggagttgaatgcgtttctcaagcagaaggag
gatctgtatgagaatgcagttgcagccaatgaaagaaaggtcgaggaggccgctgcctcc
gtcaaggacgcagaaaagcttttttctcgtgaggagcaacatctaagttacggcaacgac
gagcttaagtcgttaaaggcaaaactcaaagagttgaatgccaaagcaagcgcttcttct
gctacagaagacaacatcacaattgaaaacgcagaactcgagtcactccggaagaagctt
gagcgcaagaaaaatgacgacaactccattgccctttctgaaaccattgagcgtgacact
gagagacataatgctttggagcatgagcttgataatctcatgaggaaattgaccaatgcc
aataagcaggcagacttgttgagtaaacttgatcttctcaaggattctttaagcgtcaag
gaggaagtacacgctaagaatatcaagcaaaacgagagcgccttcgagaaagttacaggc
aaaaaattggacggcgatttcgagaagagtctccaggaaactatggcagagactcaagct
gaagtgacagaaaagacaacaaagctcaactcactaaagtctcagatggacaagctcagg
gccaatgaggagtctgacgctgcaagcttgtccaagcaagagaagtcccttgctactcac
accagtaatattctcaacattattgaaaaagacgagatcccacagtatgaagagttggtg
aaggaaacggaggaagatttcaacaccgccacctataatctcaacacattcgatgtcaca
aagagtttcaaagtcaaggcaattgagattgccaaacagtccaaatgctgcactctttgt
aacagaggcttctccagtgatgaacttgacactttcatcaatgaagtgcaacagaacctc
aataccgttacggcaagtaaattacaagaagacgtggacaccacgaagaaagatttggat
ctgatgaatgctataaggtatgatgtcttacagtaccgttcactaatctccgaagtgtct
agttgcaaggagcaagttcaaaagaaaagagccgctttgagtgaaattcagcaggaacat
gataagttggaggagagcttagatgttctccgtaccgccctcgatgaagcagcaatactc
aaacagccaattagcaatattgcacgcttgaaggacgaaattgctcatatcagaaagcag
attgatgaagtggagcaagagcttgacagcgacggaggctctgccatgtcgatggctgaa
ttgcaaaagtctcaacaagaaaaaagcttcgaactcaaaaagctaagacaaagcatcgcc
tctgccaaggatgagagggacgtcaagcagaaagatcttgctcgcctcgaaagtcagatc
aaagacaaagaacttcgaatcagcaacttgaagaactcgatgaatgagctcgtgacgctc
aaaaggtcagtcactgagacagaagagaaaatctctgcccttgaggacaagcagaaaacg
gtacagaagaatctaaaggagtacgagagaaggcttcatgatacaacgactgcttgcaat
cagctaaaagaccgctgccaacaggaagagtcgagcatgcttgaggagcttcaaaagatt
cgtcacaaggaggctcaactctcggatcttaagcagcagatttcttcctttgaagtggag
gatcttcccaaagtggagcacaatgctgcaaagatgaaagaagttcgacagcagattcag
gcattcgcccagcagcgaaaaacactcgaaaaggagacttccacgttaaaggatgctgtc
aacgatgcagtaaagactaggaggaacatcgaagataatcttcaatacagaagtacagaa
agagagcttgacgctattcgagagcaaatcgaccaacttgatgtctccaatgcagaagtt
gaaaaagagaattatcaagcagcttcaaagaatcttcgtgacaagatagctgagttgaac
ggccagcattttgggaaggccggtgaagtcaagcagatcaatgatcagatccagcagctc
caaaaggagcttaactcggagtttaaggatgtggaaaaaatgtatcacaaggagtggatt
aggcttcaaaccaatatgcttgtttccaaagacttgcagacatactccctggctcttgat
aatgccatcatgaaataccatagtatgaaaatggaccagataaataagattctacgtgag
ctttggaaccagacgtacaagggcacagatatcgatcgaatcgagataaagtgtgatgtc
aataccctgggtcgtggccgctcctacaactatcgtgtggtgatgtacaagaagagctcg
gagttggacatgagaggacgctgttctgctggacagaaagtgcttaccagtattttgatt
cgcctagctcttgctgagtgcttcggcacaaactgtggtatgattgcccttgacgagcct
acgacgaatttggacaccgaaaatgccgaatctcttgccactgctctcaacaccatcatc
gacgtcagaaaaagccagaagaatttccagctcattgtcatcactcacgacgagaaattc
ttgagccacattaacggaggaagctacatcgacaatttctacagaatcgagcgagacgag
aaccagtattctgtgatcaagagcttacctatacatttgatgcaagacgaataa
DBGET
integrated database retrieval system
