Candidozyma auris: CJI96_0005292
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Entry
CJI96_0005292 CDS
T04850
Name
(RefSeq) hypothetical_protein
KO
K14327
regulator of nonsense transcripts 2
Organism
caur
Candidozyma auris
Pathway
caur03013
Nucleocytoplasmic transport
caur03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CJI96_0005292
03015 mRNA surveillance pathway
CJI96_0005292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caur03019
]
CJI96_0005292
Messenger RNA biogenesis [BR:
caur03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
CJI96_0005292
mRNA cycle factors
P-body specific factors
CJI96_0005292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
40029476
NCBI-ProteinID:
XP_028889183
LinkDB
All DBs
Position
7:complement(386694..389741)
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AA seq
1015 aa
AA seq
DB search
MSNDHLRYLELRELNERAWAGEVVFKLAGKQDSSLKKNTGFVKKLKSSFNADQYKQILKD
VETLSLEKYSTEIVGPAFEGTLKVSKNDDIMAAVEIINALHQRLNLSFTPSYLSHVVNAI
VEKEQSDLAVKQRSLLKLITELSLTGVATSLRQCDSELLSTSALKLASKSPNDFILVPLL
KDVLSYQFPKAHALPVMISWLKRYAFLLKEENRTQIPDSCLNTLQQICSMYFDKVVGLLK
SLHREKTKLELSNKKAMIRTGRVLEEREQELKELTQVLEALDHGCPTLAELLNKEMPPID
VSVQTKNNESDVIVKASHEEETKGWWEDQRERNFYKKVPNYESVVASEGPKLKKKEYAKL
SEGEIVNRFLEKLELSTTEEDIDKLTAELHTFIPSNKATHNRILRFFLEVKKVDNVNLFA
RFLKINESFFPDLITELIDALDRGFRSQIYGDIINFKNLYFFIELIKFNLIPTHVVFHKI
RRLTLNIEGTNNADILSIFYERCGKFLLLESEYQETTREMLALLSKQSKSSRLSVNEKLS
LRNMFLIVNSFTATKNKVKATTAEMTPLQDFVSQMLKNVLLDSKLYKQAWLLGKIKFKYS
ADARDTFVSIYSRPEELGLDKLDMYAKLLKHLGTQGKVLAPLIVDALTEKVIRGLELNDY
RQNLARVAQIRFFVALYKNKVLSFRCIIDLLFKIVTWGHPNNLPLPGSTLDIDPYDNYFR
IGLCCTLLNNISFSKVEQAGLLTGSTKSLEGFLTFLQYYISTKKKPLPREIHFAVEEVYS
KTFISPARDDPSRALSLLQNFNSQSKEPVIEEETIIDDSENDAVEFSSDDDESGMNTEEE
LRSDDETSDDESHKDASGDITREDEDSDDEDDHEDEDEGLVDELVEDTAEEEEEDHAPWA
RKIEVTEEDKKFADTIDAGIRDALQESLNLSQSKSRGTFRIPAPSTLAGTQNEAVNNTCG
VLPNGSVKFSFLSRKNNVKEMHLPSDNQFVDRVVREQAAQKANRDKIIRLINNME
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatgaccatttgcgatacttagagctccgtgaacttaacgaacgtgcttgggca
ggcgaggtggttttcaagctcgccggaaaacaggacctgagtttgaagaagaacactggc
ttcgtgaaaaagcttaagagttctttcaacgctgatcagtataagcaaatcctcaaggat
gtcgaaactttgagcttagagaagtatctgacagagattgtgggaccagctttcgagggc
acattgaaggtttcgaaaaacgatgatataatggcagcggtggagatcatcaatgctctt
caccaacgcctcaatcttctgtttacgccctcttacttgtctcacgtggtcaatgctatt
gttgaaaaggagcagctggacttggcggtgaagcagaggctgctcttgaagcttattacg
gagctttctttgactggagttgctacctcactaaggcaatgcgactcagagcttctcagc
acttcagctcttaagttggcttcaaaatctccaaacgacttcattttggttccacttttg
aaagatgttctatcttatcagttcccaaaagctcatgcattgccggtaatgatctcatgg
ttgaagcgctacgcctttttactaaaagaggagaacagaacccaaattcctgattcctgc
ttgaataccttacagcagatatgctctatgtactttgataaggttgttgggctcctaaag
tcattgcacagggaaaaaacaaagcttgaattgagtaacaagaaagctatgatccgtacg
ggtagggtcctcgaggaaagagagcaagagctcaaggagcttactcaagttcttgaggct
ttggatcatggctgccctactcttgccgaacttttaaacaaagaaatgccacctatcgac
gtctcggtacagactaagaataacgagtcagatgttatcgtgaaggcttctcatgaggag
gagacgaagggatggtgggaagatcagcgtgaaaggaatttctacaagaaagttcccaat
tatgaaagcgtcgtagcctcagaggggccaaagctaaaaaagaaggagtacgcgaagctt
tcagagggtgagattgtcaatcgctttttggaaaaacttgagctttctaccactgaagag
gatattgataagcttactgctgaattgcacaccttcatcccatctaacaaggccacacat
aacaggatcttgcgcttcttcctagaggtgaagaaggtcgacaatgtaaatctttttgct
cgtttccttaaaatcaacgagtcgtttttcccagatctcataactgagctcattgatgca
ttggacagaggatttcgctcgcagatttatggagatatcatcaacttcaagaacctttac
ttcttcattgaacttatcaaatttaatctcatcccaacccatgttgtcttccacaaaata
cggaggcttacactaaatatagagggaacgaacaatgctgatattttgctgatattctat
gaaagatgtggaaaatttttgcttcttgagagtgagtaccaagaaactacacgtgagatg
cttgcacttttgagcaagcagtcaaagtcatcaagactttccgtaaacgagaagttatct
ctacgcaatatgttcttaattgtcaattccttcacagcaacaaaaaacaaagtcaaggct
actacagcggagatgacaccattacaggacttcgtcagtcaaatgcttaagaatgttcta
ttggacagtaagctttataaacaagcctggttgcttggtaaaataaagttcaaatatagc
gctgatgcccgcgatacctttgtttcgatctacctgcgacctgaggagcttgggcttgat
aagctcgatatgtatgccaaattgttgaagcatttgggaacacaaggaaaggttctcgca
cctcttattgttgatgcattgactgagaaggtgatcaggggcttagagttgaacgattac
aggcaaaacttggcaagagtggctcaaatacgctttttcgttgcactttacaaaaacaaa
gttcttagctttcgctgtattattgatttgctttttaagattgttacttggggccatcca
aataacctaccacttccgggttcaactctcgacatagatccttatgacaactatttcagg
atcggcttgtgttgtacgttgttaaataatatcagcttttccaaggtagagcaagctggt
ctcttgacaggaagcacaaaatcattggaaggctttctcacctttctacagtactatatt
ctgacaaagaagaaaccactaccgcgtgagatacactttgctgtcgaggaagtctactcc
aaaacgttcatctctcctgctcgtgatgatccctcgcgtgcactctccctacttcagaat
ttcaactctcagagtaaggagcctgtaattgaagaagagacaattatcgacgactccgaa
aacgatgctgtggagtttagttccgatgatgatgaatctggaatgaatactgaagaagag
cttcgatcagacgacgagacctctgacgacgaatcacataaagacgcaagtggtgacatc
accagagaggatgaagattcggatgacgaggacgatcatgaagacgaagatgagggtcta
gtcgatgaattagttgaggatactgctgaagaggaagaggaagaccacgctccctgggca
agaaagattgaggtcacagaggaggataaaaagttcgctgacaccatcgatgcgggcata
cgtgatgcattgcaagaatctttaaatttatcacaatcaaaatctagaggtacattcaga
atcccagcaccctccacacttgccggtacgcagaacgaagcagtgaacaacacatgtgga
gttctacctaacggaagtgtaaagttcagttttctttcaagaaagaacaatgttaaagag
atgcatctaccttccgacaaccagtttgtcgatagggttgtcagagaacaggctgcgcag
aaagcgaatagagataagattattcgcttgatcaacaacatggaataa
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