Corynebacterium auriscanis: CAURIC_03335
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Entry
CAURIC_03335 CDS
T09334
Symbol
rng
Name
(GenBank) Ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
caus
Corynebacterium auriscanis
Pathway
caus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAURIC_03335 (rng)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caus03019
]
CAURIC_03335 (rng)
03009 Ribosome biogenesis [BR:
caus03009
]
CAURIC_03335 (rng)
Enzymes [BR:
caus01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CAURIC_03335 (rng)
Messenger RNA biogenesis [BR:
caus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CAURIC_03335 (rng)
Ribosome biogenesis [BR:
caus03009
]
Prokaryotic type
rRNA processing factors
CAURIC_03335 (rng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
Motif
Other DBs
NCBI-ProteinID:
WJY72323
LinkDB
All DBs
Position
760652..764230
Genome browser
AA seq
1192 aa
AA seq
DB search
MAKISPELAAQAAQINTEEWGAKVRVHLLAKQLGLRASELLPHIESAGIEGKKVQSSLTK
QEAESVVVALSSGDDATSQPETPSAGKSASKKEKANKPQRKKTATRKKTQVAGANAAEAG
REDVADKPEKTEPVSKPETIEKGQAEQVEPAEQAEPQDQSGQEEQSEQTKQAKRSKRVEL
TEQAEPQDQSGQEEQSEQTTQAEQSEQTTQAEQTGGGQGGASQRRRARRRVVRRVIGRSA
NQSAPANEGAAAQTENAASDSAARGGGADDNDAQKAGANQSAAKDDKRAGAQRRKSKNDQ
AASTPKRVEELHPAERDESDVVDQPVRLKGSTRLASQRQWRRENRERTQTVSRSAFLARR
ESVERKLVVRDSHRSDHQGLTTQVGVVEDGMLVEHFVTSETQQSMVGNIYLGRVQNVLSS
MEAAFIDIGTGRNAVLYAGEMNWHSPHLHSKNRRIDSALKAGDQILVQVIKDPVGHKGAR
LSNRVSFAGRYLVYFPGGTTAGISRKLPEPERKRLKDILANVIPGDGGAIIRTAAENVPE
ELIGEDVARLHSIWEKVSKEEVKARDRKGAKPITLYEEPNMLVKVVRDIFNEDFKELVVD
GAKSWQVVRDYVSRMAPDLQGRLIKWNPDRHEGEDVFAAMNLDEQLTKALSRKVWLPSGG
HLIIDPTEAMTVIDVNTGSFVGSGGNLEETVTQNNLEAAEEIVRQMRLRDLGGMIVVDFI
DMVLEENRDLVLRRLTEYLGRDRTRHKVSEVTSLGLVQMTRKRLGTGLLETFSTICTECD
GRGVILHADPVEHEEEEAPRRDHGHRKERQQARRQQVMREGTGKPRRDESSRRGDKAHRD
NNQAGSSSTEVGSPAELASSAEQTESRSHDKATSTRRVRRRRVVRSVTGSQPDTDARNVD
EGLTHRRRTKGNNLADDGQAKTNRRRRANDVAIDDIAASALRNAKAEDPDEPSGADYMPN
DAHGDERASQRIARNNRGNRGNRDYRDNRGNQGNRDNRDSRDNQDTQGNRDKDSEGVSAS
RRRRVRRVVRARHVNAANTLEQGQAPADRASSSTEHTDVTQSEATQSRESQSSDSRKQRT
ARGRHADSQTFEEAKAEFEASPRRKRQTRGNSRSDIAPQPEDFERTGAKDPGQGGRGWSN
RTRDGRNQNNRNNRGHDGQGQVNRGTGQQLDSAAPRGGRGTRRVRRVVRKRT
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaaatcagcccggaacttgcagctcaggctgcccaaattaataccgaggagtgg
ggggccaaggtgcgagtccacctgctggccaagcagctgggactgcgcgcgtccgaacta
cttccacatatcgaatctgccggtatcgagggcaagaaggtgcagtcttccctcactaag
caggaagctgaaagtgttgttgtggctttgtcatcgggggatgacgccacgtcgcagccg
gaaacgccttccgcggggaagtcggcgtcgaagaaagaaaaggcaaacaagccccagcgg
aagaaaacggcaacgaggaagaaaactcaggttgctggtgcgaatgctgccgaagctggc
cgggaggacgtggcggacaagcctgagaagacggagccggtttcgaagcctgagaccatt
gaaaagggtcaggcggagcaggtagagccagccgagcaggccgaaccacaggatcagtca
gggcaggaagagcagagcgaacagaccaagcaggccaagcggagcaagcgggtcgagctg
accgagcaggccgaaccacaggatcagtcagggcaggaagagcagagcgaacagactacg
caggccgagcagagcgaacagactacgcaggccgagcagacgggtggtggccagggtggt
gcatcgcagcggcgtcgtgctcgccgcagggtagtgcgccgcgtgattggacgttccgca
aaccagagcgcgcccgcgaatgaaggtgccgctgcgcagacggaaaacgctgcgagcgat
agtgctgctcgcggtggcggtgcggacgacaatgatgcgcagaaagcgggggcgaatcag
agtgctgccaaggatgacaagcgagcaggcgctcagcggcggaagtctaagaatgaccaa
gccgcttcgacccctaagcgtgtcgaggaactgcaccctgccgagcgtgatgaatccgac
gttgtggatcaacctgttcgtctgaaggggtccacccgtttggcatctcagcgtcagtgg
cggcgcgagaaccgcgaacgtacccagactgtaagtcgatctgcgttcttggcccgtcgc
gaatccgttgagcggaagttggtggtgcgtgattctcatcgctctgatcaccaaggcctg
actactcaggttggagtggtcgaagacggcatgctggtggaacacttcgtaactagtgag
acgcagcagtcgatggtgggcaacatctacctcggccgcgtacagaacgtcctgtccagc
atggaggccgcgttcatcgacattggtactggccgtaatgctgtcctgtatgcgggcgag
atgaattggcactcgccccacctgcattccaagaaccgccgtattgattcggccttgaaa
gcgggtgaccagatcctggtgcaggtcattaaggacccagtcgggcataagggcgctcgg
ttgagcaaccgagtgagtttcgccgggcgctacttggtttacttccccggaggaacgacc
gcgggtatttcccggaagttgcctgaaccggagcgtaagcgactgaaagacatcctggcc
aatgtgattcccggtgacggcggagccattatccgcacggcagctgagaatgtccctgaa
gaactaatcggggaggacgtggcacgcctgcactccatctgggaaaaggtcagcaaggaa
gaagtgaaagctcgcgaccgcaagggtgcgaagccgatcacgctctacgaagagccaaac
atgctggtcaaggttgtccgtgacatcttcaatgaggatttcaaggaacttgtcgtcgat
ggcgcaaagtcgtggcaagtggttcgtgactatgtgtcacgcatggcacctgacttgcaa
ggtcggctcatcaagtggaatcccgataggcacgaaggcgaagatgttttcgccgcgatg
aacctagacgagcagctgacgaaggcgctgtcgcggaaggtatggctgccatccggtggg
cacctcatcattgatccgaccgaggccatgacggtcattgacgttaacacgggatcgttt
gtcggctccggtggaaacctcgaggaaacggttactcagaacaaccttgaagcggccgaa
gagatcgttcgccagatgcgcttgcgtgacctgggcggcatgattgtcgtggatttcatc
gacatggtattggaagaaaaccgggacctcgtgctgcgtcgtctgaccgagtaccttggc
cgggaccgtacccgtcacaaggtcagtgaagtgacgtcgctgggcttggtgcagatgacc
cgtaagcgtttaggtaccggtttgctggagaccttctccacgatctgtaccgaatgcgac
ggtcgcggtgtgatcttgcacgctgatcctgtggagcatgaggaggaagaagcgccacgc
cgcgatcacggccaccggaaggaacgccagcaagcgcgacgtcaacaagtcatgcgtgaa
ggtacgggcaagccacgtcgcgatgaatcctcccgtcgtggtgacaaagcacaccgtgac
aacaaccaagctgggtccagctcgactgaggtgggatcgcccgctgagttggcatcttct
gcggagcagaccgagtcgcgcagtcacgataaggccacatctacccgtcgagtgcgccgc
cgtcgcgttgtgcgtagcgtgacgggatcgcagcccgataccgatgcgcgcaacgttgat
gagggcctgacccatcgtcgtcgcaccaagggcaacaacctagccgatgacggacaggca
aagactaaccgtcgccggcgtgcaaatgacgtggctatcgacgacatcgcagcatccgcc
ttgcgcaatgcaaaagctgaggatccagatgagccatcgggtgctgactacatgcccaac
gatgcgcatggtgatgagagggcttctcagcgcatcgcgcggaataaccgaggcaaccgg
ggcaaccgcgattaccgggacaaccgaggcaaccagggcaaccgcgataaccgggacagc
cgcgataaccaggacacccaaggcaaccgcgacaaggacagcgaaggcgtaagcgcgtcc
cgccgtcgtcgcgttcgccgcgttgtccgtgcgcgccacgtgaatgccgcgaacactttg
gagcaaggtcaggcgccagccgatagggcctcatcgagtacagaacacaccgatgtcacc
caatccgaagcgacgcagtctcgtgaatcgcagtccagcgattcccggaagcagcgaacg
gcacgtggtcgccacgcggactcgcagactttcgaagaagcgaaggctgagttcgaagct
tcaccgcgccggaagcgccaaacgcgcggtaattcgcggtcagacattgcaccacaaccg
gaggactttgagcgcaccggcgctaaggaccccggtcaaggtgggcgcggttggagcaac
cgaacccgggacggccgcaaccagaacaaccgcaacaatcgcggtcatgacggccaaggt
caggttaaccgcggaacgggacagcaactggatagtgctgccccacgcggtggccgtggc
acccgtcgtgtgcgtcgcgtggttcgcaagcgaacctag
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