Corynebacterium auriscanis: CAURIC_04255
Help
Entry
CAURIC_04255 CDS
T09334
Symbol
dnaE1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
caus
Corynebacterium auriscanis
Pathway
caus03030
DNA replication
caus03430
Mismatch repair
caus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CAURIC_04255 (dnaE1)
03430 Mismatch repair
CAURIC_04255 (dnaE1)
03440 Homologous recombination
CAURIC_04255 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caus03032
]
CAURIC_04255 (dnaE1)
03400 DNA repair and recombination proteins [BR:
caus03400
]
CAURIC_04255 (dnaE1)
Enzymes [BR:
caus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CAURIC_04255 (dnaE1)
DNA replication proteins [BR:
caus03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CAURIC_04255 (dnaE1)
DNA repair and recombination proteins [BR:
caus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CAURIC_04255 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WJY72500
LinkDB
All DBs
Position
983386..986907
Genome browser
AA seq
1173 aa
AA seq
DB search
MLDGMAKVDMLAAEAKRQGMPAVGMTDHGNMFGADAFYRAMTAADIKPIIGIEAYIAPES
RFNQSRVRWGSPEQKSDDVSASGAYLHQTMIAENATGLRNLFYLSSMASYEGQLGKWPRM
DAELIAEHAEGIIATTGCPSGDVQTRLRLGQFDKALEAAAMWQDIYGKDNFFLELMDHGL
EIERRVRDDLLEIGRRLELPPLVTNDCHYVLESQAAAHEVMLCVQTGSTLDEPTLDEGGK
RFAFSGSGYYLRTAEDLRAQWDKEVPKGCDNTLWVAERVQDYSEVWDEHPFDRMPIADVP
EGETPTTWLTHEVMKGLEERFPGKPVPTDYIDRAKYEIEVIDMKGYPSYFLIVAELIKYA
RSVGIRVGPGRGSAAGSLVAYALTITNIDPMEHGLLFERFLNPERPSAPDIDIDFDDRRR
GEMIRYASERWGEDKIAQVITFGTVKTKQAIKDSARAHYGQAGFQMADRITKTLPPAIMA
KDIPLSGIMDPEHERYNEAAEVRSLIETDPDVNKIYQDARGLEGVVRQAGVHACAVIMSS
VPLLDCIPMWKRKQDGALITGWPYPACEAIGLLKMDFLGLRNLTVIGDALDNIKSNRDFD
LDLENLSTEDDPTYELLARGETLGVFQLDSGGMQELLKRMKPTGFNDIVAALALYRPGPM
GVGAHWEYADRKNGRKPIVPIHPELEEPLKEILEETYGLIVYQEQIMKISQKVANYTAGQ
ADGFRKAMGKKKPEVLEKEFVNFESGMKDNGFSDAAIKTLWDTILPFAGYAFNKSHAAGY
GLVSFWTAYLKANYAPEYMAALLTSVADKKDKSAIYLADCRHLGIRVLSPDVNESAYTFQ
SVGADIRFGLGAVRNVGEEVVESIIRSREDKGAFKDFSDYLDKIEIAAASKRVTESLIKA
GAFDSLGHPRKGLVLVHEDAVDAVISTKKAAAKGQFDLFAGFGDDETVGDVFRVDVPDQN
WERKHELAMERDMLGLYVSGHPLDGFEDALDAQVDTPMTAVISGELPHNREVKIGGIISS
VERRVDRNGNPWVICTLEDQHGAQAELLVFAKTYQMVAPQIVEDNIVLAKARISYKDDRM
SLFCEDLKSAELSVGAGSGVPLRLSIRVHQATPDNMARLKRVLRQNKGDSDVYLTLIDGE
QEVQFLLGPEMRVNKCPALMGDLKATTWEGIFA
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacggaatggcgaaagtggacatgctggcggcggaagcgaaacgtcagggtatg
cccgctgtcggtatgacagaccacggaaacatgttcggcgccgatgcgttttaccgcgct
atgacagccgcagacatcaagcccatcattggcattgaggcctacatcgcaccggaatcc
cgcttcaaccaaagccgtgtgcggtggggtagccccgaacaaaagtccgatgatgtttcg
gcttcgggtgcgtacctgcaccagacgatgattgcggagaacgccacgggtttgcgaaac
ctcttctacttgagctccatggcctcttacgagggccaactgggtaagtggccccgcatg
gatgccgagctgatcgccgagcacgccgagggcatcatcgccaccaccggatgcccctcc
ggtgacgtgcaaacccgcctgcgcctggggcagttcgataaggccctagaagcagccgcg
atgtggcaggacatttatgggaaggacaatttcttcctagagctcatggatcacggcctg
gagattgagcgccgcgtgcgcgacgatctgttggagatcgggcgccgcttggagctgccg
ccactggtgaccaatgactgccactacgtgttggaatcccaggccgcggcccacgaagtg
atgttgtgcgtgcagacgggctccaccctagacgaacccaccctcgatgaaggcggtaag
cgctttgccttctcgggttccgggtactacctgcggaccgcggaggatctgcgcgcgcaa
tgggacaaagaagtgcctaagggctgcgacaacaccttgtgggttgctgagcgcgtgcag
gattacagtgaggtctgggacgaacaccccttcgatcgcatgccgattgcagatgtgcca
gagggtgaaactcccaccacctggctgacgcacgaggtgatgaagggcttggaagaacgc
tttccaggcaagccggtgcctaccgattacattgaccgcgcgaagtacgaaatcgaagtt
atcgatatgaagggctacccttcgtacttccttattgtggcggagctcatcaagtacgcc
cgcagtgtgggcattcgcgtgggacctggccgtggttctgctgcgggttccctagtggca
tatgccttgacgattaccaatatcgacccgatggaacacggcctgttgttcgagcgcttc
ttgaacccggagcgcccatcggcaccggatatcgatatcgacttcgacgatcgtcgccgt
ggcgagatgattcgctatgcctcggaacgctggggtgaggacaagatcgcgcaggtgatc
acgttcggaacggtgaagaccaaacaggcgattaaggattccgctcgcgcgcactatggg
caagccggtttccagatggctgaccgcattacgaaaactctgccaccggcaattatggcc
aaggatattccgctgtctggcatcatggatccagagcacgagcggtataacgaggctgct
gaggtacgaagcctcatcgaaaccgacccggacgtcaacaagatctatcaagacgcccgc
ggtttggaaggcgtggtccgccaagcgggcgtgcacgcctgtgcagtgattatgtccagc
gtgcccctgctggactgcatccccatgtggaagcgcaagcaggacggtgcactgatcacc
ggttggccgtatccagcgtgcgaggccattggcttgctgaagatggacttcctgggtctg
cgcaacctcacggtcattggcgatgccttggacaacatcaagtccaaccgggatttcgat
ctggatttggaaaacctatccacggaagacgacccgacatacgaacttctggcccgtggc
gaaaccctcggcgtgttccagctggattccggcggcatgcaggaactgctcaagcggatg
aagcccaccgggtttaatgacatcgtggccgcactggcgctgtaccgtccaggcccgatg
ggcgtcggtgcacactgggaatacgccgatcgaaaaaacggtcgtaaacccattgtgccg
attcacccggagctggaagaaccgcttaaggaaatcctcgaagagacttacggtctgatc
gtgtaccaggagcagatcatgaagatctcccagaaagtcgcgaactacaccgccggtcaa
gcagatggattccgcaaggccatgggtaaaaagaagcctgaggtgctggaaaaggagttc
gtgaacttcgaatccggaatgaaagacaatggcttttccgatgccgccatcaaaaccttg
tgggatacgatcctgccgttcgcgggttacgcgttcaacaagtcccacgccgctggttac
gggttggtgagtttctggaccgcctacttgaaggctaattacgcgccggaatacatggcc
gcgctgttgacttcggtggcggacaagaaagacaaatccgcgatctacctagcggattgc
cgtcacctggggattcgggtgctatcaccggatgtcaacgaatccgcgtacaccttccag
tcggtgggtgcggacatccgctttggtctgggcgcggtgcgtaatgtgggcgaagaagta
gtggaatccatcatccgttcccgcgaggataaaggcgcattcaaggacttctccgactat
ttggacaagattgagatcgcagcggcttctaagcgcgtgaccgagtccctcattaaggcc
ggtgccttcgattccctcggccatccccgcaagggcttggtgctggtgcacgaggatgcg
gtggatgcggtgatctctacgaagaaggccgcggcgaaggggcagttcgacctgttcgcg
ggctttggggatgacgaaaccgtgggggatgtcttccgtgtggacgtgcccgatcagaac
tgggagcgcaaacacgagctggcgatggaacgcgacatgctgggcctgtacgtttcgggc
cacccgctggatggcttcgaggatgctctagatgctcaggttgatacccccatgaccgcg
gtgatctccggtgagttgccgcacaaccgggaggtcaagatcggcggcattatttcctcg
gtggagcgacgtgttgaccgcaacggtaacccgtgggtgatttgcacgctggaagatcag
cacggtgcgcaggcggaactattggtgtttgccaagacctaccaaatggttgccccgcag
atcgtggaggacaacattgtcctagctaaggcacgaatctcttacaaggatgaccgcatg
agcctgttctgcgaggatctcaaatccgcggagctgtctgtcggcgcgggcagcggcgtg
cccctgcgcttgagtatccgcgtgcaccaggcaactcctgacaacatggcacgcctcaag
cgtgtgctgcgacagaacaagggtgattcggacgtgtacctcacgctcatcgatggggaa
caggaagttcagttcctgctgggccccgaaatgcgcgtaaacaaatgccccgccctcatg
ggcgatctcaaggccaccacgtgggagggaatcttcgcctag
DBGET
integrated database retrieval system
