Corynebacterium auriscanis: CAURIC_06575
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Entry
CAURIC_06575 CDS
T09334
Symbol
fpg1
Name
(GenBank) Formamidopyrimidine-DNA glycosylase 1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
caus
Corynebacterium auriscanis
Pathway
caus03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
caus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CAURIC_06575 (fpg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caus03400
]
CAURIC_06575 (fpg1)
Enzymes [BR:
caus01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CAURIC_06575 (fpg1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CAURIC_06575 (fpg1)
DNA repair and recombination proteins [BR:
caus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CAURIC_06575 (fpg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
WJY72941
LinkDB
All DBs
Position
complement(1505140..1506036)
Genome browser
AA seq
298 aa
AA seq
DB search
MPELPEVEVVRRGLESHLLGRRFAAVEVRHPRAVRGFDPATFSFLLDATRIRDIARRGKY
LWMVLESEGDVPDRALFVHLGMSGQMLVNRENAPVAKHERIRATFVDGTVLSFVDQRTFG
RWAVMDLVPDPHGTASADTASAGLPKVLKIPAAVAHIAMDPLEPGFDLEAAVARIKSKNS
EIKRVLLDQTVIAGIGNIYADEALFAAGVRPRRRASSLSRPTIRRIVEQARAVMVRALAE
GGTSFDSLYVNVNGNSGYFARSLQVYGRAGQLCRVCGTPIKRIQFAGRSSHYCPVCQK
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattacccgaagttgaagtggtccgccgcggcctagaatcccatctcctaggc
cgtcgcttcgccgccgtcgaggtacgccatccccgggctgtacgcgggtttgaccccgcc
actttttcttttttacttgacgccacgcgcatccgcgatatcgcccgccgcggaaaatac
ttgtggatggtgctggaatccgaaggtgacgtgcccgatagggcactgttcgttcaccta
ggcatgagtggccagatgctggtgaaccgggagaacgcaccggtagccaagcatgagaga
attcgcgcgactttcgtggatggcaccgtgctgtctttcgtggatcaacgaacctttggc
cgctgggcggtgatggacttggtgcctgatccgcacggtacagcaagtgcagatacagca
agtgcaggtctaccaaaggtgcttaagattcccgcggctgttgcccacattgcgatggat
cccttggaacctgggtttgacctcgaggcagccgtcgcacggattaagtccaagaattct
gagatcaagcgggtgttgttggatcagaccgtgattgcgggcattggcaatatttatgcg
gatgaagccctgttcgccgccggggtgcgaccacgtcggcgcgctagtagcctgagccgt
cccaccatccggcggatcgtggaacaagccagggccgtgatggtgcgcgcgttggctgaa
ggtggcaccagctttgattcgctgtatgtgaatgtgaacgggaactcggggtacttcgcg
cgttcgctgcaggtctacgggagggcaggacaactctgccgcgtgtgcggcacgcctatc
aagcgcattcagttcgctgggcgatcgtcgcactattgcccggtgtgccagaagtaa
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