Corynebacterium auriscanis: CAURIC_09915
Help
Entry
CAURIC_09915 CDS
T09334
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
caus
Corynebacterium auriscanis
Pathway
caus03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
caus00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CAURIC_09915 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caus03021
]
CAURIC_09915 (rpoC)
03400 DNA repair and recombination proteins [BR:
caus03400
]
CAURIC_09915 (rpoC)
Enzymes [BR:
caus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CAURIC_09915 (rpoC)
Transcription machinery [BR:
caus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CAURIC_09915 (rpoC)
DNA repair and recombination proteins [BR:
caus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CAURIC_09915 (rpoC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
WJY73586
LinkDB
All DBs
Position
complement(2236258..2240226)
Genome browser
AA seq
1322 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRRWSRGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAANIITSVDEEGRHNDQSTLEAEMMLEKKEVEADRDAELAERSETLEQD
LAEAEAAGLKADAKRKIQTAAEREMRHIRERADREIDRLDEIWNTFVKLAPKQMIVDENI
YTELQDRYEDYFTGGMGAESIQTLIRNFDLEAEAESLREIIRDGKGQKKLRALKRLKVVA
AFLRSGNDPAGMVLDCIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMLDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKLMALELFKPFVMKRLVEKSYAQNIKSAKRMVERQR
SEVWDVLEEAIAEHPVMLNRAPTLHRLGIQAFEPILVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLASNNILSPASGKPLAMPRLDMVTGLYYLTLVKGEDEFGGQ
GAYQPATEDGPAKGVYSSLAEAIMAYDRGTLGLQAPIHVRINHLRPTAEVEAELFPDGWQ
RGETWLAKTTLGRVLFNELLPWNYPYVEGVMAKKPQATVINDLAAKYPMITVAQTVDKLK
DAGFYWATRSGVTITMHDVLVLPNKQEVLDEYEAKARVIEKKLARGKINEAERYQSLVDL
WKEATDFVGQSVENLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVTNSRGEYITRPVK
TSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREDDCGTSQGV
VMDVTTPILDGEGKPTGQFVAADFVETSVLGRYLAADAKDSEGNVKLEAGKVVGELELKA
LIDAGVENVKVRSVMTCATATGVCSTCYGRSMATGKKVEIGEAVGIVAAQSIGEPGTQLT
MRTFHLGGVGGDITGGLPRVQELFEARVPKAKSPIASVDGRVKIEDDDAFYTLTIVPDDG
SDEVVYEKLSKRQGLATLGTGGVERPIREGDRVKMGQQLLKGAADPHEVLRVLGRRGVQQ
HLINEVQKVYRDQGVAIHDKHIEIIVRQMLRRVTVIDSGSTEFLPGSLVEHADAVAASKE
AVKSGGRPVEVRAEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSDKLIGLKENV
IIGKLIPAGTGIARYRNISVEPTEEARAAAYSLPSTFGDGFYGDEGYGEFTGAAVPLDDM
EL
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgtcaacttcttcgacgagcttcgcatcggcctggctacggcagacgacatc
cgtcgttggtcccgtggcgaggtaaagaagcccgaaacgattaactaccgtactctcaag
ccagagaaggacggtctgttctgcgagcgcatcttcggtcctacccgcgactgggaatgt
gcttgcggtaagtacaagcgtgtccgctacaagggcatcatctgtgagcgctgtggtgtg
gaagtcaccaagtccaaggtgcgccgtgagcgcatggggcacattgagttggctgctccc
gtaacgcacatttggtacttcaagggcgttccatcccgtctgggttacctgttggacctc
gctccgaaggatctggaaaagatcatctacttcgcggcgaacatcatcacctctgtggac
gaagagggccgtcacaacgaccagtccaccctcgaggccgagatgatgttggagaagaag
gaagtcgaggccgaccgcgatgcggaactggccgagcgttccgagaccctcgagcaggat
ttggctgaggcagaggctgccggtctgaaggccgatgccaagcgcaagatccagaccgcc
gcagagcgcgagatgcgacacatccgtgagcgtgccgaccgcgagatcgaccgcctagac
gagatctggaacaccttcgtcaagctggctccaaagcagatgatcgtcgatgagaacatc
tacaccgagctgcaggaccgctacgaggattacttcactggtggcatgggtgctgagtcc
attcagactctgatccgcaacttcgacctggaagccgaggccgagtctctccgtgagatc
atccgcgatggtaagggtcagaagaagctccgcgccctgaaacgcctgaaggttgttgca
gctttcttgcgctccggtaacgatcccgctggcatggttctggactgcatcccagtgatc
cctccggagctccgcccgatggtgcagctcgacggtggtcgcttcgccacgtccgacctc
aacgacctgtatcgccgcgttatcaaccgcaataaccgcctgaagcgcatgctggatctc
ggcgctcctgagatcatcgtgaacaacgagaagcgcatgctgcaggaatccgttgacgcg
ctgttcgacaacggccgtcgtggacgtccggtcactggcccaggtaaccgcccgctgaag
tccctttctgacttgctgaagggtaagcaaggacgtttccgtcagaacctgctgggtaag
cgcgtggactactccggtcgttctgtgattatcgttggtccgcagctgaagctgcaccag
tgtggtttgccaaagctgatggctttggagctgttcaagccattcgttatgaaacgtctg
gtggaaaagagctacgcccaaaacatcaagtccgctaagcgcatggtggagcgtcagcgc
tccgaggtgtgggacgttctggaagaggccatcgcagagcacccagtgatgttgaaccgt
gcaccaactctgcaccgtctgggtatccaggcgttcgagccaatcctggttgaaggtaag
gctatccagctgcacccactggcatgtgaggccttcaacgccgacttcgacggtgaccag
atggcagtgcacctgccactgtccgctgaggcacaagctgaggctcgcatcctgatgctg
gcttccaacaacattttgtccccagcatccggtaagccgctggctatgcctcgtctggac
atggtgactggcctgtactacctgaccctggtcaagggtgaggacgagttcggtgggcag
ggtgcttaccagccagctaccgaggacggtccagcaaagggtgtttactcttccctagcc
gaagccatcatggcgtacgaccgcggcaccttgggcctgcaggctccgattcacgttcga
atcaaccacctgcgcccaacggctgaggttgaagcagaactgttcccagacggttggcag
cgcggtgagacctggttggctaagacaaccctgggccgcgtgctgttcaacgagttgctg
ccatggaactacccatacgttgagggcgttatggccaagaagccacaggctacggtcatt
aacgacttggcggcgaagtacccaatgatcacggttgcgcagactgtggacaagctcaag
gatgccggtttctactgggcaacccgctccggcgtgaccatcaccatgcacgacgtgttg
gttctgccgaacaagcaggaagtcctagacgagtacgaggctaaggctcgtgttatcgag
aagaagctggcacgaggcaagatcaatgaagccgagcgctaccagtccctagttgacctg
tggaaggaagcaacggactttgtgggtcagtcggtggagaacctgtacccggatgacaac
ccgatcccgatgatcgtgaagtccggtgctgccggtaacatgcgccagatctggaccctg
gccggcatgaagggcatggttactaactctcgtggtgagtacatcacccgtccagtgaag
acctccttccgtgaaggcctgtccgtgctggagtacttcaacaactcccacggttctcgt
aagggcctggccgataccgctctgcgtaccgccgactcgggttacctgacccgtcgtctg
gtggacgtggcacaggacgtcatcgttcgcgaggacgactgtggtacctcccagggtgtc
gtcatggacgtcaccacgccaatcctcgatggcgagggcaagcctacgggtcagttcgtc
gccgcagacttcgtggagacctccgtactgggtcgctacttggcggccgacgccaaggat
tccgagggcaacgtcaaactcgaggctggcaaggttgttggcgagctcgagctgaaggcg
ctcatcgatgcgggtgtggagaacgtcaaggttcgttctgttatgacctgtgcgacggcc
acgggcgtgtgctccacttgctacggccgttcgatggcaaccggtaagaaggttgaaatc
ggcgaggccgtgggcatcgtggctgcacagtccattggtgagcctggtacccagctgaca
atgcgtacgttccaccttggtggcgtcggtggcgatattacgggtggtttgccacgcgtg
caggagctgttcgaagcacgtgtacccaaggcaaagtccccaatcgcttccgttgatggt
cgcgtgaagatcgaggacgacgatgcgttctacaccctcacgatcgtcccagatgacggt
tccgacgaggtcgtgtacgagaagctgtccaagcgccagggcctggcaactttgggcacg
ggtggcgtagagcgtccaatccgcgagggcgatcgtgtcaagatgggccagcagctgctg
aagggtgcagcagatccccacgaggttctgcgtgttctcggccgtcgtggcgtgcagcag
cacctgattaacgaagtccagaaggtctaccgtgatcagggtgtggctattcacgacaag
cacatcgagatcatcgttcgccagatgttgcgccgcgtgacagtcatcgactcgggttcc
accgagttcctcccgggttccttggtggagcacgcagatgccgtggcagcttccaaggag
gccgtcaagtccggcggtcgcccagtcgaggttcgcgctgagatcatgggtatcaccaag
gcctcactggcaaccgagtcgtggctgtccgcagcatccttccaggagaccactcgtgtt
cttacggatgccgctatcaacaagcgttccgataagctgattggtcttaaggagaacgtg
atcatcggtaagctgatcccggctggcacgggtattgctcgctaccgcaacatttctgtg
gagccaaccgaagaggcacgtgcagcggcttactccctgccctccaccttcggtgacggt
ttctacggcgacgaaggctacggagaattcaccggagctgcggttccactggacgacatg
gaactctaa
DBGET
integrated database retrieval system
