Chlamydia avium: M832_01860
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Entry
M832_01860 CDS
T03069
Symbol
hup
Name
(GenBank) putative DNA-binding protein HU
KO
K05788
integration host factor subunit beta
Organism
cav
Chlamydia avium
Brite
KEGG Orthology (KO) [BR:
cav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cav03032
]
M832_01860 (hup)
03036 Chromosome and associated proteins [BR:
cav03036
]
M832_01860 (hup)
03400 DNA repair and recombination proteins [BR:
cav03400
]
M832_01860 (hup)
DNA replication proteins [BR:
cav03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
M832_01860 (hup)
Chromosome and associated proteins [BR:
cav03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
M832_01860 (hup)
DNA repair and recombination proteins [BR:
cav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
M832_01860 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AHK63055
UniProt:
W8JFT3
LinkDB
All DBs
Position
207360..207671
Genome browser
AA seq
103 aa
AA seq
DB search
MANMATMTKKKLISTISQDHKIHPNHVRTVIQNFLDKMTDALVKGDRLEFRDFGVLQVVE
RKPKVGRNPKNAAVPIHIPARRAVKFTPGKRMKRLIETPSKNS
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggctaatatggctaccatgactaagaaaaaactgattagtacaatatctcaggaccat
aagattcatccgaatcatgtgcgcactgtaatccagaattttttggataagatgacagat
gccctagtcaaaggtgatagattggaatttagggactttggtgttctacaagtggtagag
aggaaacctaaagtaggtcgtaatcctaaaaatgctgctgtccccattcatattcctgca
agacgtgctgtaaaatttactccaggaaaacggatgaaacgcctgattgaaactccttct
aagaattcttaa
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integrated database retrieval system
