Chlamydia avium: M832_08760
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Entry
M832_08760 CDS
T03069
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cav
Chlamydia avium
Pathway
cav03030
DNA replication
cav03430
Mismatch repair
cav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M832_08760 (dnaE)
03430 Mismatch repair
M832_08760 (dnaE)
03440 Homologous recombination
M832_08760 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cav03032
]
M832_08760 (dnaE)
03400 DNA repair and recombination proteins [BR:
cav03400
]
M832_08760 (dnaE)
Enzymes [BR:
cav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M832_08760 (dnaE)
DNA replication proteins [BR:
cav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M832_08760 (dnaE)
DNA repair and recombination proteins [BR:
cav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M832_08760 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
HHH_3
T2SSK
DUF655
Motif
Other DBs
NCBI-ProteinID:
AHK63725
UniProt:
W8JHU8
LinkDB
All DBs
Position
complement(955330..958794)
Genome browser
AA seq
1154 aa
AA seq
DB search
MANHLILLCKNIEGYRNLCTLSSLAFTEGFYYFPRIDRELLSQYSRGLICLSACLSGSVA
QAALESEEALEKDLLWYQQLFHDDFYTEIQLHKMPEEKISSLNEEWLKHEYYQFIDTQTR
VNHAVLEASKRLGICTVATNDIHYIHPEDWLAHEILLNVQFGETIRIAKQNTYVPNPKRK
VYLSREYYFKSPEEMAQIFSNHPETIANTLEVANKCNLELNFSNKHYPIYVPESLKEKGT
YTEEERYIASSEFLKNLCEQELTTKYTEEALAHIAKKFPDQNPLELVKKRLEMEISIIIP
KGMCDYLLIVWDIIRWAKDHGIPVGPGRGSGAGSVMLFLLGITEIEPIRFDLFFERFINP
ERLSYPDIDIDICMAGRERVINYAIERHGKDNVAQIITFGTMKAKMAVKDVGRTLDVPLS
KVNQIAKHIPELNTTLSKALETDPNLNELYTHDTEAAQVIDMAMRLEGSIRNTGVHAAGV
IICGDCLTNHIPICISKDSTMITTQFSMKPVESVGMLKIDFLGLKTLTSIHIAIQAIYKK
TGKLLNMASLPLDDKTTFALLHQGKTMGIFQMESKGMQELAKNLRPDSFEEIIAIGALYR
PGPMDMIPSFINRKHGKEIIEYDHPLMEPILKETYGIMVYQEQVMQIAGSLASYSLGEGD
VLRRAMGKKDINQMLKERTRFCERACKNGIDTELATTIFDKMEKFASYGFNKSHAAAYGL
ITYTTAYLKANYPKEWLAALLTCDSDDVEKIGKLIHEARSMDICVLPPDINESGTNFIAT
DQGIRFAMGAIKGIGKGLVESIIEEREKNGPYLSIRDFIQRSDLKKVTKKHIESLIDSGC
FDIFDADRDRALATLESMYEAIAKEKKEAATGVMTFFSLDSMNQEKTETLSPNVPVIHRS
KKEKLKKEKELLGIYLTEHPMDAVKDILPKLSVVHFGEFDHLPHGAIVRTIFIIDKVTTR
LSSKGQRKFAILRVNDGIDSYELPIWPEMYAEQQELLEEDCLIYAILAIDKRSDSLRLSC
RWMKDFASINEKVLQECDEMFDKIKGQMQKMSYINEKNKHRGKIAMSKTKDSRPPASAVK
LSLDLEKLRHSHICTLKHILHKYPGPRELSLIFIKDNQKVASIAPDTDYFISEDTTDLKK
DLENAQLPIRLISI
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atagcgaatcacttgattcttctatgtaaaaatatagagggttaccgtaatctttgcact
ctgtcctctttagcattcacagaaggcttttattattttccaagaatagatcgtgagctt
ctctcccaatattcccgtggattaatttgtctttccgcctgtttatctggatctgttgct
caagcagccttagaatccgaagaggctcttgaaaaggacctcctctggtatcaacagctt
tttcatgacgacttttatactgaaattcaactccataaaatgcctgaagagaaaatctct
tctcttaatgaagaatggcttaaacatgaatactatcaatttatcgatacacaaactcgc
gtaaaccatgctgtattagaagcaagtaaacgtttaggcatttgtacagtagctacaaat
gatattcattatattcaccccgaagattggctcgctcatgaaattctcctaaatgtacaa
tttggagaaaccattcgtattgctaaacaaaatacttacgttcctaatcctaaaaggaaa
gtttaccttagtagagagtattattttaaatctcctgaggaaatggctcagatatttagc
aatcatcctgaaactattgccaatactttagaagttgctaataaatgtaacctcgaattg
aatttctcgaacaaacactatccgatttatgtcccagaaagtctaaaagaaaaaggtaca
tacaccgaggaagaacgctatattgcctcttccgaatttttaaaaaatctttgcgaacaa
gagttaactacaaaatatactgaagaagcactagcacatattgcaaagaaatttcccgat
caaaaccctcttgaattagtgaaaaaacgcttggagatggagatttctattattatccct
aagggaatgtgtgattatcttcttattgtctgggacattatccgttgggcgaaagatcat
ggtattcctgtaggccctggaagaggttcaggagcaggatctgttatgttatttttatta
ggcattacagaaatcgaacccatacgttttgatctattttttgaaagattcattaatcct
gaacgcttatcctatccagatatcgatattgatatttgcatggcaggcagagaacgggtt
attaattatgccatagaacgtcatggcaaagataatgtagctcaaattattacttttgga
actatgaaagccaaaatggcagtaaaagatgtgggcagaacattagatgtcccgttatca
aaagtaaatcaaattgctaagcacattcctgaactaaacactactctctccaaagcacta
gaaacagatcctaatttaaatgagttatatacgcacgatactgaagctgctcaagttatt
gatatggctatgcgtctagaaggatctattcgcaatacaggagtacatgcagccggagtc
attatttgtggtgattgtctcaccaatcatattcctatttgcatttctaaagattctaca
atgattactacacaattttccatgaaacctgtggaaagtgtgggaatgttgaaaattgac
tttctaggactaaagacgctaacaagtattcatatcgctattcaagcaatttataaaaaa
acaggaaagctattaaatatggcttccctgcctttggatgataaaacaacatttgctctt
ctacatcagggtaaaactatgggcatatttcaaatggaatccaaaggtatgcaagaatta
gctaaaaatctccgtccagattcttttgaagagattattgcaataggtgctttatatcgt
cctgggcctatggatatgatcccttcttttatcaatcgcaagcatggtaaggaaattatt
gaatatgaccatccccttatggaacccattctcaaagaaacatatggaatcatggtctat
caagaacaagtcatgcaaattgcaggttctttagcaagctattcattaggagagggtgat
gttttacgccgcgctatgggtaaaaaagacattaatcaaatgcttaaagaacgtacccga
ttttgtgaaagagcatgcaaaaatggtatcgacacggaattagcaacaacaatttttgat
aaaatggagaagtttgcttcttatggatttaataaatctcatgcagcagcctatggttta
attacttatacaactgcttatcttaaagcaaattatcctaaagagtggctagcagctctt
ctaacttgtgattctgatgatgttgagaaaattggtaaactcattcatgaagcacgtagc
atggacatttgtgtcctaccccctgatattaatgaatcggggacaaactttattgctaca
gatcaaggcattcgttttgctatgggtgctattaaaggcattggtaaaggacttgtagaa
agtattattgaagaaagagaaaaaaatgggccttacctaagtattcgggattttatccaa
cgctctgacctaaagaaggtaacaaaaaaacatatagaaagtttaattgattctggctgt
tttgatatttttgatgcagatagagaccgagctcttgctaccttagaatccatgtatgaa
gcaattgcaaaagaaaaaaaagaagctgctacaggagtcatgacattcttttctctagat
tccatgaatcaagagaaaacagaaactctatctcctaatgttcccgtaatacatagatca
aaaaaagaaaaactcaaaaaagaaaaagaattattaggtatttatctaactgagcatcct
atggatgctgtaaaagatattttgcctaaactgtctgtcgtgcatttcggagaatttgat
catctccctcacggagcaatagttcgtactatatttattatagataaagttactacacgc
ctctcttctaaagggcaaagaaaatttgctatattacgtgttaatgacggtattgattct
tatgaattacctatatggccagaaatgtatgctgagcagcaagaactattagaggaagac
tgtttaatttatgctattttagctatcgataaacgtagcgattccttgcgattatcctgt
cgatggatgaaagatttcgcttcaattaacgaaaaagtccttcaagaatgtgacgagatg
tttgacaaaatcaaaggacaaatgcaaaagatgtcctatatcaacgaaaaaaacaaacat
cgagggaaaattgcaatgtcaaaaactaaagattcgcgtccaccagcttctgctgtaaaa
ctatcccttgatcttgagaagcttcgccatagccacatatgtactttaaaacatatatta
cataagtatcctggcccacgggaattatctttaattttcattaaagacaatcaaaaagta
gcttcgattgctcctgatacagactatttcatttctgaagatactactgatctcaaaaaa
gatctagaaaatgcacaactcccaatacgtttaattagtatttaa
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