Chlamydia avium: M832_09160
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Entry
M832_09160 CDS
T03069
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cav
Chlamydia avium
Pathway
cav03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cav00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M832_09160 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cav03021
]
M832_09160 (rpoA)
03400 DNA repair and recombination proteins [BR:
cav03400
]
M832_09160 (rpoA)
Enzymes [BR:
cav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M832_09160 (rpoA)
Transcription machinery [BR:
cav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M832_09160 (rpoA)
DNA repair and recombination proteins [BR:
cav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M832_09160 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_A_bac
AMIN-like
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AHK63763
UniProt:
W8JSE9
LinkDB
All DBs
Position
984797..985927
Genome browser
AA seq
376 aa
AA seq
DB search
MSDNSRNLLYDKFELPESVKIVAVEGCGGAIDKQARFVAEPLERGMGHTLGNALRRALLI
GLEAPAIIAFSMTGVLHEYMALEGVIEDVTNIVLNLKGALLKKYPFQDGSNGRSAQIIRS
TISIDASDLAAAGGQKVVTLADLLQEGGFEAVNPNHVIFTVTKPMQLEVALRVAFGRGYT
ASERIILEDKGMNEIVLDAAFSPVVLVNYFVEDTRVGQDTDFDRLILQVETDGRVSPKEA
LAFSTQILAKHFSIFEKMDEKKIVFEEAISIEKENKDDILHKLILGINEIELSVRSTNCL
SNANIETIGELVIMPEPRLLQFRNFGKKSLCEIKNKLKEMKLELGMDLSQFGVGLDNVKE
KMKWYAEKIRSKNVKG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtcggataattcaagaaatttactttatgacaaatttgaacttcctgagtcggttaag
atcgttgccgtagagggttgtggcggtgctattgataagcaagcacgttttgtcgctgag
cctttggaaagaggaatggggcatacattaggtaatgctttaagacgagcattgctaatt
ggtttggaagctcctgcgattattgctttttctatgaccggtgttctgcatgaatatatg
gctcttgaaggggttatagaggacgtaacaaatatagttttgaatttgaagggagcttta
ttaaagaagtatccttttcaggatggtagtaatggacgtagcgcacaaataatacgatct
actatttctattgatgcttcagatttggccgcagccggagggcaaaaggtagtaacttta
gccgatttattgcaagaaggaggatttgaagcagttaatcctaatcatgtgattttcact
gtaacaaagccaatgcaacttgaagttgctttaagggtagcttttggtagaggttataca
gcttcagaaagaatcattcttgaagataaagggatgaacgagatcgtcttggacgctgct
ttttctcctgtggtgttagtaaattattttgttgaagacactcgtgttggtcaagatact
gattttgatcgtttgattttacaagtggaaactgatggtagagtgtctcctaaagaagct
ttagctttttctactcaaattctagctaaacatttttctatttttgaaaaaatggatgaa
aagaagatcgttttcgaagaggcaatttctatagaaaaagagaataaagatgatattctt
cataagttgattttaggaatcaatgagatagaactttctgtcagatctacgaattgtttg
tccaacgcaaatattgagaccattggtgaattagtaattatgccagagcctcgtcttttg
cagttcagaaatttcggtaagaaatctctttgtgaaattaagaataagctgaaagaaatg
aagcttgagttgggtatggatcttagccagtttggtgttggtctagacaatgttaaagag
aaaatgaagtggtatgccgaaaaaattcggtcgaaaaatgttaagggataa
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