Corylus avellana (European hazelnut): 132161777
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Entry
132161777 CDS
T09426
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cave01009
]
132161777
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132161777
Enzymes [BR:
cave01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
132161777
Protein phosphatases and associated proteins [BR:
cave01009
]
HAD phosphatases
Fcp/Scp phosphatases
132161777
Transcription machinery [BR:
cave03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
132161777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
Retrotran_gag_2
zf-CCHC
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
132161777
NCBI-ProteinID:
XP_059427943
LinkDB
All DBs
Position
ca9:complement(21200122..21207921)
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AA seq
904 aa
AA seq
DB search
MSRLGFKSVVYHGDLRLGEVDAIRVSDQNFQFPNNEIRIHSVSPRSKRCPPLSILQTISS
FSVLCKLESSLPVEQSHLINLHAECFDKNKTAVVLIGDEEIHLVAMPSKQNKFPCFWCYS
VPAGLYNASLGMLNLCCLAIVFDLDETLIVANTMKSFEDRIEALRSSVARQTDQVRVLEM
IAEMKRYIDDRMLLKQYRENDYVVDSDGKVYKVQLEEVLRLSDNHERVVRPVIRLQEKNI
VLTRINPENRDTSVLVRLRPAWEDLRSYLTVKGRKRFEVYVCTMAERDYALEMWRLLDPE
AQLIGSNKLLDRVICVKSGSRKSLLNVFRDGMCHPKMAMVIDDRSMVWEDKDQPRVHVVP
AFTPYYAPQAEAAHAVPVLRVARNVACNVRSYFFKEFDMNLLQRISEVFYEDEVVNLPPA
PDVSDYMMPEDAGFVPNGNNAPISEGMNGVEVERRLNLTDQKYINDLATPSLTSRPELRY
ETSQPPLSILPNVIGHTFTRPLMPSQKPGLLGAPVRRDAISSDCDFDMKRGLLTTKRGPD
IRNQSSGEPPILSRLHTQSASVMQPQGGWLVEDDISRGHSNNQPLGFVQDAEPLKPDKQR
AHLNPVPRSTPGSTPTGLFSQTSQVKVEEACAGYGLQNQNLPLASQLSEVGVSENQVSNS
REVARRCSSKVEFRSVVSTSKDLQFSVQPCLGFPALDATQEDKQQFDRWNHFNELARTFI
LTSLSDNLMDGLSLDSNMLVSLKQKFGEENNAARQDTTKSLIDTRMTKEVLVRNHCQDMI
ACLEELEVLDAKIDCQPRVDEILESLSKSFNQYKRSVSMNKKANKKAYKKVQAASSESKG
RKKKKGFKRDGKQVAIGVNGAGNKIVKVKSKGKCFHCGAEGHWLRNCPKYMDFKRQGVFK
RLNN
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcttagggtttaaatccgtggtctatcacggggacttgcgtttgggagaggtg
gacgctatccgggtctcggaccagaatttccagttcccaaacaacgagattcgcatccac
agcgtgtcgccaaggagtaaacgatgccctccgctctcgattctccaaacgatttcttcg
ttttcggttctatgcaaactcgagtcgtccttgcccgtcgaacagtcgcatctgatcaat
ctccacgccgagtgcttcgacaaaaataagacggccgtggtattgattggggacgaagaa
attcatttggtggcaatgccaagtaagcagaacaagtttccgtgcttttggtgctattcg
gttcctgcaggtctgtacaatgcgagcttggggatgctgaatctgtgttgtctggcgatc
gtgttcgatcttgatgaaacgctcatcgttgcgaacacaatgaagtcgtttgaggacaga
attgaggcgcttcgaagctcggttgcacgccagactgatcaggtgcgcgtgttggaaatg
attgccgagatgaagcggtacattgatgatcgaatgctgttgaagcagtacagggagaac
gattatgtggtggatagtgatgggaaggtatataaggtgcaattggaggaggttctgcgg
ctatctgataaccatgaacgagttgttcggcctgtaatacggttgcaagaaaagaatatt
gtccttactcgtatcaatcctgagaatcgtgataccagtgtgcttgtgaggttgcgaccc
gcgtgggaggatttgagaagctatttaactgtaaaaggtaggaaacggtttgaagtttat
gtgtgcactatggcagaaagagattatgccttagaaatgtggaggcttctcgacccggag
gcacaacttataggttcaaataaactcctggaccgcgttatatgtgtcaaatcaggctcc
aggaaatcgttgctaaatgtcttccgggatggcatgtgtcatccaaagatggcaatggta
attgatgaccgttcaatggtttgggaagataaggaccaacctcgagttcatgtagttcct
gcattcactccttattatgctcctcaggcagaggcagctcatgctgttccagtccttcgt
gtagcaagaaacgtcgcatgcaatgtcagaagttactttttcaaagagttcgatatgaat
ttattacaaagaatctcggaagtattttatgaagatgaggtggtaaatttacctcctgct
cctgatgtgagcgactacatgatgccagaggatgcgggatttgtaccaaatggtaataat
gctcccattagtgaagggatgaatggtgtcgaagttgaacgaaggttaaacctaacggat
cagaagtatatcaacgacttggctactccttcattgacaagtcgtcctgagttaagatat
gaaacctctcaacctcctctttcaatcttaccaaatgtcatcggccacacatttacaaga
ccattgatgccttctcagaagcctggtttacttggagctcccgttagacgagatgcaatc
tcatctgattgtgattttgatatgaagagaggactccttacaacaaagcgtggtccagat
ataaggaatcaaagctcaggtgaacctcctattttgtcaagattacatacacaatcagca
tcagtgatgcagccacagggaggctggttggtggaagatgatatcagtagaggacattca
aataatcaacctttgggatttgttcaagatgctgaaccattaaaacctgataaacagcgt
gcccatctaaatccagttcctcgtagcacaccaggatctactcctactggtttattctca
caaacatcccaagtgaaggttgaagaggcatgtgctggttatggtttgcaaaatcaaaat
cttccacttgcaagtcagctatcagaggttggtgtatctgaaaatcaggtgtccaatagc
agagaggttgcacgtagatgcagctccaaggttgaattcaggtctgttgtaagcaccagt
aaagatttgcaattttctgttcagccttgtctaggttttccagctttggatgccactcag
gaggacaaacaacaatttgatcgttggaatcatttcaacgagttggcgagaaccttcatc
ttgacatctttgtcagataatctcatggacggcctttcactcgattcaaacatgttggtt
agtctgaagcagaaatttggtgaagaaaataacgctgctaggcaggacacgacaaagagt
ctaattgatactagaatgactaaagaagttctagttcgcaatcattgtcaagatatgatt
gcatgcttagaagaactggaggtgttggatgccaagattgattgtcaacctcgagtggat
gagatccttgagtctctgtcaaagtcattcaatcaatacaaacgtagtgtttccatgaac
aaaaaggcgaataaaaaggcttacaaaaaggttcaagctgcttcttctgagtcgaaaggc
cggaaaaagaagaagggttttaaaagagatggcaagcaagttgccataggagtgaatgga
gcagggaacaaaatagtaaaagttaagtccaaaggaaagtgtttccattgtggcgcagaa
gggcattggttaagaaactgccctaagtatatggatttcaaacgccaaggggttttcaag
agattaaataactga
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