Corylus avellana (European hazelnut): 132161854
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Entry
132161854 CDS
T09426
Name
(RefSeq) replication factor C subunit 3 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03030
DNA replication
cave03410
Base excision repair
cave03420
Nucleotide excision repair
cave03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132161854
03410 Base excision repair
132161854
03420 Nucleotide excision repair
132161854
03430 Mismatch repair
132161854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cave03032
]
132161854
03036 Chromosome and associated proteins [BR:
cave03036
]
132161854
03400 DNA repair and recombination proteins [BR:
cave03400
]
132161854
DNA replication proteins [BR:
cave03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
132161854
DNA Replication Termination Factors
ELG1-RFC complex
132161854
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
132161854
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
132161854
Check point factors
HRAD17(Rad24)-RFC complex
132161854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA
Rad17
Sigma54_activ_2
RuvB_N
Mg_chelatase
AAA_5
AAA_22
AAA_11
DUF815
nSTAND3
ABC_tran
AAA_23
AAA_24
RsgA_GTPase
AAA_29
Spore_III_AA
NPHP3_N
AAA_2
FtsK_SpoIIIE
TsaE
SprT-like
AAA_16
RNA_helicase
AAA_30
Motif
Other DBs
NCBI-GeneID:
132161854
NCBI-ProteinID:
XP_059428040
LinkDB
All DBs
Position
ca9:13254648..13263209
Genome browser
AA seq
354 aa
AA seq
DB search
MLWVDKYRPKTLDHVMVHQDIAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALIRQMFG
PSAEKVKVENKTWKVDAGSRTLDIELTTLSSTNHVELSPSDAGFQDRYVVQEIIKEIAKN
RPIDTKGKRGFKVLVLNEVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSKVTEAIRSR
CLNVRINAPTDEEIVKVLEFIGNKEGLQLPSGFAARIADKSNRSLRRAILSFETCRVQQY
PLTSKQVIPPMDWEEYIAEIASDVMKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLYE
LLKKLDAELKHEVCHWAAYYEHRMCLGQKAIFHIEAFVAKFMSIYKSFLIATFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgctatgggtggacaagtaccgacccaaaaccttagaccatgtcatggtccaccaagac
atcgcccaaaaccttaagaaactggtcacggagcaggattgcccgcatctgctcttctat
ggtcctccgggctccggcaagaaaaccctaatcatggccctcattcgtcagatgttcggc
cctagcgctgagaaggtgaaggtggagaataagacatggaaagtcgatgctggaagtaga
actcttgatatagagcttaccacattgtcaagcaccaaccatgtggaactgagtcccagt
gatgcagggtttcaggacagatatgttgttcaagaaataattaaagaaatagctaaaaat
agacctattgacacaaaaggaaaaagaggatttaaagtattagtgctcaatgaggtagac
aaactttcgagagaagcccaacattctctccgaagaactatggagaaatatagtgcttat
tgtagacttatactatgctgcaacagttcttcaaaggttactgaagcaatccggtcccgc
tgcttgaatgtgcggataaatgcaccaacagacgaagagattgttaaggtattggaattc
attggaaacaaagaaggactgcaacttccatctggatttgctgctcgtatagcagataag
tcaaatcggagtttaaggagagccatactgtcatttgagacttgccgtgtccaacagtat
cctcttacaagcaaacaagtaatacccccgatggattgggaggagtatattgctgaaata
gcatctgacgtaatgaaggagcagagtcctaaaaggctgtttcaggttcgagggaagttg
tatgagctacttattaattgtattccaccggagattatcttgaagagactgctttatgaa
ttattaaagaagttggatgcagaactaaaacatgaggtttgccattgggctgcatattat
gagcataggatgtgtcttggacagaaagccatatttcacattgaagcatttgtggcgaag
ttcatgagcatttataagtcttttctcattgcaacgtttggataa
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