KEGG   Corylus avellana (European hazelnut): 132162325
Entry
132162325         CDS       T09426                                 
Name
(RefSeq) replication factor C subunit 3-like
  KO
K10756  replication factor C subunit 3/5
Organism
cave  Corylus avellana (European hazelnut)
Pathway
cave03030  DNA replication
cave03410  Base excision repair
cave03420  Nucleotide excision repair
cave03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cave00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    132162325
   03410 Base excision repair
    132162325
   03420 Nucleotide excision repair
    132162325
   03430 Mismatch repair
    132162325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cave03032]
    132162325
   03036 Chromosome and associated proteins [BR:cave03036]
    132162325
   03400 DNA repair and recombination proteins [BR:cave03400]
    132162325
DNA replication proteins [BR:cave03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    132162325
  DNA Replication Termination Factors
   ELG1-RFC complex
    132162325
Chromosome and associated proteins [BR:cave03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    132162325
DNA repair and recombination proteins [BR:cave03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     132162325
  Check point factors
   HRAD17(Rad24)-RFC complex
    132162325
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA Rad17 Sigma54_activ_2 RuvB_N Mg_chelatase AAA_5 AAA_11 DUF815 AAA_22 AAA_23 nSTAND3 ABC_tran AAA_24 RsgA_GTPase ATPase_2 AAA_2 AAA_29 Spore_III_AA FtsK_SpoIIIE NPHP3_N AAA_30 TsaE RNA_helicase AAA_16
Other DBs
NCBI-GeneID: 132162325
NCBI-ProteinID: XP_059428555
LinkDB
Position
ca9:13243386..13246981
AA seq 226 aa
MLWVDKYRPKTLDHVMVHQDIAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALIRQMFG
PSAEKVKVENKTWKVDAGSRTLDIELTTLSSTNHVELSPSDAGFQDRYVVQEIIKEIAKN
RPIDTKGKRGFKVLVLNEVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSKVTETQNAR
LEHQKLVSAKIQLFGKMVVKVLLKFQTLKLTFEHKLNNEASAQMDD
NT seq 681 nt   +upstreamnt  +downstreamnt
atgctatgggtggacaagtaccgacccaaaaccttagaccatgtcatggtccaccaagac
atcgcccaaaacctcaagaaactggtcacggagcaggattgcccgcatctgctcttctat
ggtcctccgggctccggcaagaaaaccctaatcatggccctcattcgtcagatgttcggc
cctagcgctgagaaggtgaaggtggagaataagacatggaaagtcgatgctggaagtaga
actcttgatatagagcttaccacattgtcaagcaccaaccatgtggaactgagtcccagt
gatgcagggtttcaggacagatatgttgttcaagaaataattaaagaaatagctaaaaat
agacctattgacacaaaaggaaaaagaggatttaaagtattagtgctcaatgaggtagac
aaactttcgagagaagcccaacattctctccgaagaactatggagaaatatagtgcttat
tgtagacttatactatgctgcaacagttcttcaaaggttactgaaacccaaaacgcacgt
ttggagcatcaaaagctcgtttcagccaaaatacagttgtttggtaaaatggttgtgaaa
gtgcttttgaagtttcaaacgttgaaactcacgtttgagcataagctgaataatgaagct
tctgctcaaatggacgattag

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