Corylus avellana (European hazelnut): 132162608
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Entry
132162608 CDS
T09426
Name
(RefSeq) ABC transporter A family member 1 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132162608
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cave02000
]
132162608
Transporters [BR:
cave02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
132162608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
SMC_N
RsgA_GTPase
AAA_22
AAA_29
nSTAND3
Motif
Other DBs
NCBI-GeneID:
132162608
NCBI-ProteinID:
XP_059428864
LinkDB
All DBs
Position
ca9:complement(4317389..4354432)
Genome browser
AA seq
1892 aa
AA seq
DB search
MGTGRRQLKAMLRKNWLLKIRHPFTTAAEILLPTVVMLLLIAVRTQVDTQIHPAQPYIRK
GMFVEVGKGESPSFQQILESLLAKGEYLAFAPDTEETRTMINLISMKFPLLKLVTRVYKD
ELDLETYIRSDLYGSYNQVKNCSNPKIEGAVVFHDQGPQLFDYSIRLNHTWAFSGFPNVK
SIMDVNGPYLNDLELGVSPVPTMQYSFSGFLTLQQVMDAFIIFASQQAETNSTSQNIELT
SAQSFGTASSLKLPLMQFSPSSIRIAPFPTREYTDDEFQSIIKNVMGVLYLLGFLYPISR
LISYSVIEKEQKIKEGLYMMGLKEGIFHLSWFIAYALQFAISSGIITACTMTSLFKYSDK
SVVFMYFFSFGLSAIMLSFLISTFFTRAKTAVAVGTLSFLGAYFPYYTVNDQAVPMILKV
LASFLSPTAFALGSINFADYERAQVGLRWSNIWRASSGVNFVVCLLMMLLDALLYCVIGL
YLDKVLPRENGLRYPWHFIFHRCFWKKKSIVEHHASSLKVTFSDKILKKKASFSGKDTFE
PAVEAISLDMKQQELDGRCIQIRNLHKVYATKKGKCCAVNSLKLTLYENQILALLGHNGA
GKSTTISMLVGLLHPTSGDATVFGKNIITDMDEIRKGLGVCPQNDILFPELTVREHLEIF
AILKGVKEEFLERVVTDMIDEVGLADKTSTTVKALSGGMKRKLSLGIALIGDSKVIILDE
PTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDRIAIMANGSLRCCGSSLFL
KHQYGVGYTLTLVKSAPTAPVASDIVHRHIPSATCVSEVGTEISFKLPLASSSSFESMFR
EIESCMSRSVGNSETSGCEDKDYLGIESYGISVTTLEEVFLRVAGCDYDEVECIERNEGF
LLPDAAISLASHDHAPKKYLYSKLHGNYKCILGVISTIVGRACGLIFATVLSFINFLSMQ
CCCCCFISRSTFWQHSRALFIKRMTSARRDRKTIVFQLLIPAVFLLFGLFLLKLKPHPDQ
RPLTFTTSQFNPLLRGDGGGGPIPFDLSWPIAKEIAQYVEGGWIQSFKPSTYKFSDSEKT
LADAIEAAGPSLGPVLLSMSEFLMSSFNESYQSRYGAIVMDDQNEDGSLGYTVLHNSSCQ
HAAPTFINLMNAAILRLATHNKNMTIQTRNHPLPMTESQRLQRHDLDAFSAAVIVSIAFS
FIPASFAVPIVKEREVKAKHQQLISGVSVLSYWSSTYIWDFVSFLFPSSFAIVLFYIFGL
DQFIGRGCVLPTVLMFLEYGLSIASLTYCLTFFFSDHTMAQNVVLLVHFFTGLILMVISF
IMGLIPATASANSFLKNFFRLSPAFCFADGLASLALLRQGMKDKSSDGVFNWNVTGASIC
YLGLESIIYFLLTLGLELWPSHKLNPVRIKEWWSKKGLQPGTSSYLEPLLKPSSEAVALD
LDEDIDVKTERNRVLSGSIDNAIIYLRNLQKVYPGGMHCGTKVAVQSLTFSVQAGECFGF
LGTNGAGKTTTLSMLSGEELPTGGTAYIFGKDICSNPKAARRHIGYCPQFDALLEFLTVR
EHLELYARIKGVPEYRIDDVVMEKLEEFDLLKHVDKPSFSLSGGNKRKLSVAIAMVGDPP
IVILDEPSTGMDPLAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGRL
RCIGSPQHLKTRFGNHLELEVKPAEVSTVDLENLCQIIRERLFDIPSHPRSLLDDLEVCI
GGIDSIASENASAAEISLSKEMIIAIGRYLGNEERTKALVLSTPVSDGNFGEQLSEQLVR
HGGIPLPIFSEWWLAKEKFSVIDSFVLSSFPGVTFKGCNGLSVKYQLPFGEGLSLADVFG
HLEQNRVQLGIAEYSISQSTLETIFNHFAANP
NT seq
5679 nt
NT seq
+upstream
nt +downstream
nt
atgggaactgggcggagacagttgaaggccatgctccgcaagaactggctcctcaaaatc
cgtcaccctttcactaccgctgctgagatattgctccctacggttgtgatgttgttgtta
atagcagtaaggacgcaagtcgatacccaaattcacccagcacagccgtatatccggaaa
ggaatgtttgtggaagtgggcaaaggagaatctcctagtttccaacaaattttagaatcg
ttgttggcaaagggagagtatttggcttttgcaccagatacagaagagacgaggacaatg
attaacttaatctcaatgaaatttcccttgttgaagctagttactagagtttacaaagat
gaattagacctggaaacctacatacgctcggatctctacggtagctataatcaagtcaag
aattgttcaaatccaaagatcgaaggcgcagtagtgtttcatgatcaaggtcctcagtta
tttgattacagtatacgcctcaaccacacatgggctttctcgggatttcctaatgttaaa
tccatcatggacgtaaatggtccttatctcaatgacttggaactgggtgtcagtcctgta
ccaacaatgcagtatagcttcagcggatttttgactcttcaacaagtaatggatgcattc
attatatttgcttcccagcaagctgaaactaactctacctctcaaaatatagaacttact
tcagcgcaatccttcggcacagcctcctcgcttaagttgccactgatgcaatttagccct
tcaagcataagaatagctccctttccaactcgtgaatacactgatgatgagttccagtcc
atcattaagaatgttatgggtgtattgtatcttttgggatttctctatccaatctctcgc
ctgataagctattctgtgattgagaaggaacagaaaataaaagaaggtctctacatgatg
ggcctaaaagaggggattttccatctttcgtggtttattgcatatgctttgcagtttgcg
atttcatctgggattattacagcctgcaccatgacaagccttttcaagtatagtgataag
tcggtggtttttatgtacttcttttcgtttggactaagtgcaatcatgctatcatttttg
atctctacattcttcacacgagccaaaacagctgtggcggttggaaccctatcttttcta
ggtgcctattttccttattacactgtcaacgaccaggctgtccctatgatattaaaggtc
cttgcttcttttctttctcctacagcctttgctctagggtcaattaactttgctgactat
gagcgtgctcaagttggacttcgttggagcaacatatggcgggcatcatctggagtgaat
tttgtggtctgtctcctgatgatgttgcttgatgcactgctgtattgtgtgattggtctt
tacctggataaggtccttcccagggagaatggactacgttatccatggcacttcatattc
cataggtgcttctggaaaaagaaaagtattgttgaacatcatgcttccagtttaaaagtt
acatttagtgataagattttgaagaaaaaggcaagtttttctggtaaagatacttttgaa
cctgccgtggaagcgataagcttggacatgaagcaacaagagcttgatggcagatgcatc
caaattaggaatctgcataaggtgtatgctacgaagaaggggaaatgttgtgctgttaac
tcgttgaagttgaccttgtatgaaaatcagattcttgctcttctagggcacaatggagct
ggaaaaagtacaaccatttcaatgcttgttggccttcttcatcctacttcaggagatgct
acggtttttggaaagaatatcataacagacatggatgagatacggaagggattaggtgtg
tgccctcaaaatgatattctttttccagaattgaccgtgagagagcatttggaaattttt
gctatattgaagggtgtgaaggaagaatttttggagagagttgttacagatatgattgat
gaagtgggtttggctgataaaaccagtacaactgttaaggctctttctggtggcatgaag
aggaaattgtctcttggaattgcactaatcggagatagcaaggttattattctcgatgaa
cctactagtggaatggatccatactcaatgcgcttgacgtggcagttaataaaaaaaata
aaaaagggcaggataatattactgacaacacactcgatggatgaagctgatgaactagga
gatcgaatagctattatggcgaatggttcattgagatgctgtggaagttcccttttcttg
aagcatcagtatggggttggttatacactaacactagtgaagtctgcacctactgcccca
gtagcttctgatattgtacaccgtcatattccatcggcaacatgtgtgagtgaggttgga
accgagatttccttcaagcttcctttagcatcttcatcatcttttgaaagtatgtttagg
gaaattgaaagttgcatgagtagatcagttggtaactctgaaacaagtgggtgtgaggac
aaagactatctgggcattgaaagttatggtatatctgtaacaactctggaggaggtattc
ctgagagttgcaggatgtgactatgatgaagtggaatgcattgagcgtaatgaaggcttt
cttttacctgatgctgcgatttctcttgcttctcatgatcatgctcccaaaaagtatttg
tattcaaaacttcatggaaattacaaatgcattcttggggtcatatcaaccatagtgggc
agagcttgtggtttaatttttgctacagttttgagtttcataaacttcttaagtatgcag
tgctgttgctgttgtttcatttcaaggtcaacattttggcaacattctagagcattattc
ataaaaaggatgacatctgctcggagagaccggaaaacaattgttttccagcttctaatt
cctgcagtcttcttgctttttggactttttttgctcaagctcaaaccacatcctgatcag
cggcctctgacctttacaacttcacaatttaatcctctattacgtggtgatggtggtggt
ggtccaattccttttgatctatcctggcctattgcaaaggagattgcacagtatgttgaa
ggcgggtggattcaaagctttaaaccaagtacatataaattctcagattcagaaaagaca
ttagctgatgcaatcgaggcggctgggccatctttgggtccagttttactttctatgagt
gaatttttgatgtctagctttaacgaatcctaccagtcaaggtatggggcgattgtgatg
gatgaccagaatgaagatggaagtctagggtacactgtactacacaacagctcttgtcag
catgctgctccaacttttatcaatttaatgaatgctgcgattcttaggctcgctacgcat
aacaaaaatatgacaattcaaacacgtaatcatcctttgccaatgacggaaagccagcgc
ttgcaacgccatgatcttgatgcattttctgcagcagttattgttagcattgccttctct
ttcattcctgcctcatttgcggttcccattgtaaaggaacgcgaagttaaagctaaacac
caacaactaataagtggggtttctgtactttcgtattggtcgtctacatatatatgggac
ttcgtcagcttcttatttccttcatcttttgcgatagttcttttttacatctttggtctg
gatcagtttattggaaggggttgtgtcttgccaacagtccttatgttcttggaatatgga
ttatcaattgcgtcattaacatattgccttacatttttcttttctgaccacaccatggca
cagaatgtggttctcctggtccactttttcactggactcattcttatggttatctcattc
attatggggcttataccggcaacagcaagtgcaaattcttttcttaagaatttcttcaga
ttatctccagcgttttgctttgctgatgggcttgcttcgttggctcttctacgacaaggg
atgaaagataaatcaagtgatggggtttttaattggaatgttactggcgcctcgatttgt
tatctcggtcttgagagcattatttacttcctcttgacactagggcttgaactctggcct
tctcacaaattgaatcctgtcagaatcaaggagtggtggagtaagaaaggtctccagcca
ggcacttctagttatttagaacctctcttgaaaccttcctcagaagctgttgctcttgat
cttgatgaagacatagatgtgaaaacggaaagaaacagggtactttcaggttcaattgat
aatgccatcatctatttgcgtaatcttcagaaggtgtatcctggaggaatgcattgcggc
acaaaagtcgcagtacagtcattgactttctcagttcaagcaggagaatgttttggattt
ttaggaacaaatggtgctgggaaaaccacaacactttcaatgctgtctggagaagaattg
ccaactggtggaactgcttatatttttggcaaagacatatgctccaatcccaaggctgct
cgtcgacatatcgggtattgtccacaattcgatgctctattagaatttttaactgtccga
gagcaccttgagctttacgcaagaataaaaggagttccagaatacaggatagatgatgtt
gtaatggaaaagttagaggagtttgatttgttgaagcatgtggacaagccttcattttcc
cttagtggtggaaacaagcgcaaattatctgttgcaattgcaatggtgggagatcctcca
atagtcattctagatgagccatccacaggtatggatcctcttgccaaacgattcatgtgg
gaagtgatttctcgtttatctacaagacaaggaaaaacagcagtgattcttacaacacac
agcatgaatgaagctcaagctctgtgcactaggattgggataatggttggaggccgacta
agatgcattgggagtcctcagcatctgaaaacacgatttggaaatcaccttgagctagag
gttaaacctgctgaagtcagtactgtggacttggaaaacctttgccaaattattcgagaa
aggctttttgacattccttctcacccaagaagtttacttgatgatcttgaagtttgcatt
gggggtattgattccatagcatcagagaatgcatccgcagcagagattagtctgtcaaag
gaaatgataattgcaattggacgctatcttggcaatgaagaaagaacaaaggcacttgta
ttgtccacacctgtttctgatgggaattttggtgaacagctatctgagcagttggttcga
catggtggcataccattaccaatattttccgagtggtggttagcgaaagaaaagttctct
gtgatcgattcatttgtactctcttcatttcctggtgtcacattcaaaggatgcaatggg
ttgagtgttaaatatcagttgccatttggagaaggcctctcacttgcagatgtttttgga
cacctggaacaaaatagagttcagctgggcattgcagaatacagtatcagtcaatctact
ctggagaccatatttaatcattttgctgcaaacccatga
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integrated database retrieval system
