Corylus avellana (European hazelnut): 132162739
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Entry
132162739 CDS
T09426
Name
(RefSeq) clathrin heavy chain 2-like
KO
K04646
clathrin heavy chain
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04142
Lysosome
cave04144
Endocytosis
cave05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132162739
04142 Lysosome
132162739
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
132162739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cave04131
]
132162739
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cave04147
]
132162739
Membrane trafficking [BR:
cave04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
132162739
Exosome [BR:
cave04147
]
Exosomal proteins
Proteins found in most exosomes
132162739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
CREPT
Motif
Other DBs
NCBI-GeneID:
132162739
NCBI-ProteinID:
XP_059428949
LinkDB
All DBs
Position
ca10:21183581..21195328
Genome browser
AA seq
1702 aa
AA seq
DB search
MSGSTPSQTAANAPISARETLTLPSLGINPQFITFTHVTMESDKYICVRETSPQNSVVII
DMTMPNQPLRRPITADSALMNPNSRILALKAQVAGTTQDHLQIFNIELKAKVKSHQMPEQ
VVFWKWITPKMLGLVTLTSVYHWSIEGDSEPVKMFERAANLVNNQIINYRSDPTEKWLVL
VGIAPGSPERPQLVKGNMQLFSVDQQRSQALEAHAASFATFKVAGNENPSILICFASKTL
NAGQVASKMHVIELGAQPGKPSFTKKQADLFFPPDFPDDFPVSMQISQKYGLIYVITKLG
LLFVYDLETATAVYRNRISTDPIFLTSEASSVGGFYAINRRGQVLLATVNEDTIVKFVSG
SLNNLELAVNLAKRANLPGADELVVQRFQELFAQTKYKEAAELAAESPRGILRTPDTVAK
FQSVPVQAGQTPPLLQYFGTLLTRGKLNGFESLELSRLVVNQNKKNLLENWLAEDKLECS
EELGDLVKTVDGDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQT
ILRSDPQGAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGF
LQTKVLEINLVTFPNVADAILANGMFSHYDRPRIAQLCEKGGLYLRALQHYTELPDIKRV
IVNTHAIEPQSLVEFFGTLSREWALECMKDLLVVNLRGNLQLIVQAAKEYSEHLGVDACI
KLFEQFKSYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDPEKT
KNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQL
LDDECPEDFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNAL
GKIIIDSNNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSL
FKLQARYVVERMDGDLWEKVLTPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTAD
LPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVA
VEAQLYEEAYAIFKKFNLNVQAVNVLLDNIRSIERAVEFAFRVEEDAVWSQVAKAQLREG
LVSDAIESFIRADDATQFLDVIRAAEDANVYHDLVKYLLMVRQKTKEPKVDSELIYAYAK
IDRLSDIEEFILMPNVANLQNVGDRLYDEALYEAAKIIYAFISNWAKLAVTLVKLQQFQG
AVDAARKANSSKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNEL
ISLMESGLGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWK
ELTYLYIQYDEFDNAATTIMNHSPEAWDHMQFKDVIVKVASVELYYRAVHFYLQEHPDLI
NDLLNVLALRVDHSRVVDIMRKAGHLRLVKPYMVAVQSNDVAAVNEALNEIYIEEEDYDR
LRESIDLHDNFDHIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAME
TCSQSGERELSEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELAWMNNIIDFSFPYL
LQFTREYTSKVDELVKDKLEAQKEVKAKAKEEQDVAAQLNMHAQLLPLALPAPPMPGGYA
PPPMGGMGMPPMPGFGMPPMGY
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atgtctggctccacgccctcccagaccgcggccaacgcccccatatccgcgagagaaacc
ctaactctaccgagcctggggatcaacccgcagttcatcaccttcacgcacgtgacgatg
gagtctgacaagtacatctgcgtgagagaaacgtcgccgcagaacagcgtcgtcatcatc
gacatgaccatgcccaatcagcccctccgccggcctatcaccgctgactcggccctcatg
aaccccaattccagaatcctcgctctcaaggctcaagttgcgggaactactcaggatcac
ttacaaatattcaacattgaactaaaagcaaaggtcaagtcgcatcagatgccagagcag
gttgtcttttggaaatggatcaccccaaagatgctaggtcttgtcacactgacctcagtt
tatcattggtcaattgaaggtgattctgagcctgtgaagatgtttgagcgagcagctaat
ttggtaaataatcaaataatcaactatcgtagcgatcctactgaaaagtggttggtcttg
gttggaattgctcctggttcacccgagaggccccaactggtcaaaggaaatatgcagctt
ttctctgtggatcagcaacgtagtcaagctctagaagcacatgctgcgtcatttgccacg
tttaaagttgcagggaatgaaaatccttcaattctaatttgttttgcctcaaagaccttg
aatgctggacaagttgcatcgaagatgcatgttattgaacttggtgcccagccaggcaaa
ccatcatttaccaagaaacaagcagatctattctttcccccagattttcctgatgacttt
cctgtttcaatgcagatatcgcaaaaatatgggttaatatatgtgatcacgaagcttgga
cttctttttgtgtatgacctagagacagctactgcagtgtatagaaaccgaatcagtaca
gatcctatatttttgacatcagaagcttcatcagttgggggcttttatgccatcaataga
cgtgggcaggtgttgcttgccactgtaaatgaagacacaattgtaaaatttgttagtgga
tcgttgaacaatttggaacttgctgttaatctcgccaaaagagcaaaccttcctggtgca
gatgagctggttgtccaacggtttcaagagttgttcgctcagaccaagtataaggaggct
gcagagcttgctgcagaatctcctcggggaatactccgtacccctgatactgttgctaaa
tttcagagtgttcctgtgcaagcagggcaaacaccaccattattgcagtactttggaaca
ctgttgacgagaggaaaactcaatggttttgagtctttggaattatcacgccttgttgta
aatcagaacaaaaagaatcttttggagaattggttggcagaggacaagctggaatgtagt
gaggagcttggagatcttgtgaagacagtggatggtgaccttgcgctgaaaatatatatc
aaagctagggcaactccaaaagttgttgcagcatttgctgagaggagggagtttgacaag
attttgatatactcaaagcaggttgggtacacacctgattatttgttccttctgcaaacg
attttgcggtcagatccccagggggctgttaattttgcactgatgatgtctcaaatggag
ggaggctgcccagttgactacaacacgataacagatctgtttcttcagaggaacttaatc
cgtgaggcaacagcttttctgctggatgtgctgaagccaaatctacctgaacatggcttc
cttcaaacaaaggttttggaaattaaccttgtgacatttccaaatgttgcggatgctata
ttagccaatggtatgttcagccattacgaccgcccacgtattgcacaactttgtgaaaaa
ggtggtttatatttgcgggcccttcagcactatacggagttgcctgatattaaacgtgtc
attgtgaatactcatgcaattgaaccacagtcgcttgttgagttctttggaaccctttcc
agagaatgggctcttgagtgcatgaaagatcttctagtggtcaatcttagaggcaatctt
cagctaattgtgcaggctgccaaagaatactctgagcatttaggtgttgacgcctgcata
aaactatttgagcagttcaagtcctatgaagggttatactttttcttagggtcatatttg
agctccagtgaggatcctgatatccacttcaagtacattgaagctgctgctaaaaccggc
caaattaaggaggtagaacgtgtgacgcgggaatctaacttttacgaccctgaaaagaca
aagaactttctgatggaagccaagcttccagatgcgcgtcctctgattaatgtctgtgat
cgttttggttttgttccggatctcacccattacctatacactaataacatgcttcgctat
attgaaggttacgttcaaaaggtcaatccaggaaatgctcctctagttgtagggcagctg
ttagatgatgagtgccccgaagatttcatcaaaggtcttattctttcagttcgttctctt
cttcctgttgagcccctggtggaggaatgtgagaaaaggaatcgtctccgcttgctaact
cagttcttagagcatcttgtgagtgagggaagccaagatgtacatgttcacaatgctctg
ggtaaaatcatcattgacagcaacaataatcctgagcattttctcacaaccaacccatac
tacgattctcgtgtcgtgggaaaatattgtgagaaaagagatcccactcttgctgtggtt
gcttaccgtagagggcaatgtgatgatgaacttataaatgtcacaaataaaaactcctta
ttcaaactgcaggctagatatgtggttgaaaggatggatggtgacctctgggagaaagtt
cttactcctgaaaatgagtatagaaggcagctaattgatcaagttgtgtctactgctttg
cctgaaagcaaaagtccggagcaagtgtcagcagctgttaaagcttttatgacggcggat
cttccacatgaactaattgagcttcttgagaagattgtgctccaaaattctgcatttagt
ggcaactttaatctgcagaatctgctgatccttactgccatcaaggctgacccgtcaaga
gttatggattatattaataggttagacaattttgatggacctgctgttggggaggtggct
gtggaagctcaattatatgaagaagcatatgccatctttaaaaagttcaatttgaatgtt
caggcagtgaatgtgctgttggataacattcgtagcattgaacgagctgtggagtttgca
ttccgggttgaagaagatgctgtttggagccaagttgccaaggctcaactgcgagagggg
ctagtgagtgatgctattgagtcatttatccgtgcagatgatgccacccaatttttagat
gtcatacgggctgctgaggatgcaaatgtgtaccatgacttggtgaagtaccttctaatg
gttaggcagaagaccaaagagcccaaggtggacagtgaactcatttatgcatatgctaag
attgatcggctcagcgacattgaagagttcattctcatgccaaatgttgctaatctccaa
aatgttggagatcgcttatatgatgaagccctatatgaggcggcaaagatcatatatgca
tttatttcaaactgggctaaactggcagttactctggtgaagctacaacagtttcaaggt
gctgttgacgcagctcggaaagccaacagctcgaaaacatggaaggaagtctgctttgcc
tgtgttgatgctgaggaattccgcttggctcagatatgtggtctaaacatcatcatacag
gtggatgacttggaagaggtcagtgagtattatcagaacaggggatgctttaacgagctc
atttctctcatggagagtggactggggttggaacgtgctcatatgggcatctttactgag
ttgggagttttatatgcaagatatcgtcctgagaagcttatggagcacattaaattgttc
tcaacccgtctgaatattccaaagctcatacgagcttgtgatgaacaacagcactggaag
gaattaacttacttatacatccaatatgatgagtttgacaatgctgcaactaccattatg
aaccactccccggaagcatgggaccacatgcaattcaaggatgtgatagtcaaagttgca
agtgttgagctctactatagggctgtgcatttttacttgcaggaacatccggatcttatc
aatgatcttcttaatgtgcttgcccttcgtgttgaccatagccgtgtggtggatataatg
cgaaaggctggtcacctccgtcttgtgaagccatacatggttgcagttcagagcaacgat
gttgctgctgtaaacgaagctttgaatgagatttacatagaggaggaggactatgacaga
cttcgtgaatcaattgatctgcatgataactttgatcacataggccttgcacagaagatt
gagaaacatgaactccttgagatgaggcgtgttgctgcttatatttataagaaagcaggc
agatggaagcagtccattgcattgtcaaagaaagataatctttacaaggatgccatggag
acatgttcacagtctggcgagcgtgaactttcagaggagttgcttgtctatttcattgag
cagggaaagaaagagtgttttgcatcgtgcctctttgtttgttatgacttaatccggcca
gatgttgctcttgagctagcatggatgaacaatatcattgatttttccttcccatacctc
ttgcagtttactcgagagtacacaagcaaggtagatgaacttgtcaaggacaaacttgaa
gctcaaaaagaggtgaaagctaaagcgaaggaggagcaggatgtggctgctcagctgaat
atgcatgcccagttgctgcctcttgctttgcctgcaccaccaatgccaggcggttatgct
ccaccaccaatgggcgggatggggatgcctccgatgccaggtttcggcatgccaccaatg
ggctattga
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integrated database retrieval system