Corylus avellana (European hazelnut): 132162973
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Entry
132162973 CDS
T09426
Name
(RefSeq) protein CNGC15b-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
132162973
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cave04040
]
132162973
Ion channels [BR:
cave04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
132162973
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
UBM
Motif
Other DBs
NCBI-GeneID:
132162973
NCBI-ProteinID:
XP_059429164
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Position
ca10:13551195..13554798
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AA seq
679 aa
AA seq
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MGHSNSRLKRVQDDVEMGNLPGISGDEVMMNLNNRKETGKCFKAKVLSRVFSEDYEKEKS
KILDPRGKAISQWSKIFLAACLVSLFVDPLFLFIPEVRVPPAVCIQNGTTPKISLTIIRS
MCDVFYVIHMFVRFHTAYVAPSSRVFGRGELIIDPSKVAFRYLRRDFWIDLIAALPLPQV
LTWVVIPNIGGSVVAVKKISLWFIMMIQYLPRVLLIYPLSSQIVDATGVVSETAWAGAAY
NLMLYLLGSHISGAWWYILSVQRQEACWRSACNLEQSIGCQNVFFDCRRVNDLPRLNWVN
STNVTNLCDPNANFYQYGIYANAVTSNVIGSGFFNKYFYGLWWGLQQLSSTGQNLTTTTY
IGEILFTISVATQGLVLFALFIGNMQRYLQSTTLRLEEWRIRRTDTEQWMHHRQLPPELR
QSVREYDQYKWLATRGVHEEELLNTLPTDLRREIKRHLCLSLVRRVPLFNQMDETILDVI
CERLKPALCTKSMVLVREGDPVNQMLFVIRGHLDSCTTDGGRSDFYNSCRIGPGDFCGEE
LLNWALDPRPHVILPSSTRTVKAITEVEAFALVAEDLKFVASQFRRLHSKQLRHTFRFYS
HQWRAWAACFIQAAWRRNRKFKQMAHPHAPGESAKESFWSRYADDLLKRTRSRLAGTHSA
RMDSNVVNSLQKPPEPYFD
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgggtcacagtaattcgaggctcaaaagagttcaagatgatgtggaaatgggaaaccta
ccaggaatcagtggagatgaagtgatgatgaatctaaataacaggaaggagacgggaaaa
tgtttcaaagccaaagtcctaagcagagtattttccgaggactacgagaaggagaagagc
aagattctggacccacgaggaaaagccatcagccaatggagcaagatattcttagcggca
tgtcttgtctctttgttcgtggatccactgtttttgttcatcccggaagtgagagtgccg
ccggcggtctgcatacaaaatgggacgacgcccaaaatcagcctcacaatcatacgatcc
atgtgtgatgtcttttacgtcattcacatgtttgttcggttccatacagcctacgtggca
ccttcttcccgcgtgtttgggagaggggagctcatcattgatccttccaaggttgccttc
aggtacctccgaagagacttctggatcgatctcatcgctgccctgccccttcctcaggtg
ttaacttgggtagttatacctaatattggcggaagtgtagtggcagtgaaaaagatatct
ctttggtttataatgatgatccaataccttccaagagtgcttcttatttatcctctctca
tcccaaattgttgatgcaactggtgttgtcagtgaaacagcatgggcaggagctgcttac
aatcttatgctttaccttttagggagccatatttcaggggcatggtggtacattctatca
gttcagcgacaagaagcatgctggagaagtgcgtgcaatttggagcaatcaataggttgc
caaaacgtcttcttcgattgccgcagggttaacgaccttccaaggcttaactgggtcaac
tcaacaaatgtcacaaatctatgcgatccaaatgctaacttttatcagtacggtatatat
gcaaatgcagtgacctcaaatgttattggctctggtttcttcaacaagtacttttacggt
ttgtggtggggcttgcagcagttgagttctacaggacaaaatcttactacaaccacttac
attggagagatacttttcaccatcagtgtcgccacccaaggtctggttctgtttgcgctc
ttcattgggaatatgcaaagatacctgcaatcaacaacactgcggctagaagagtggagg
ataaggagaactgatacagagcaatggatgcatcacaggcaattgccgccggagctaagg
caatctgttcgggagtacgatcaatataagtggttggctactagaggggtgcatgaagaa
gagcttctcaataccctccctactgatctccggcgagaaatcaaacgtcatctctgcctc
tctttagtccgacgagtcccactgttcaatcaaatggatgaaacaatactagacgtgata
tgcgagaggcttaagccagcattgtgcacgaaaagcatggtccttgtgcgggaaggcgat
cctgtgaatcagatgctcttcgtaattcgagggcatcttgactcttgcaccaccgatggt
ggccgctccgatttctacaactcctgccggataggccccggtgatttctgcggtgaagag
ctgcttaactgggctttagacccgcgcccgcacgtcatccttccgtcgtccacaagaacg
gtgaaggccataactgaagtagaggcgtttgctcttgtagcagaggacttgaaatttgtg
gcctcccaatttcggagactgcatagcaaacagcttagacacactttcaggttctactcg
catcaatggcgggcgtgggcggcgtgtttcatacaggcagcgtggcgcaggaatagaaag
tttaagcaaatggctcacccccatgctcctggggagagtgcaaaggagtcgttctggtcc
aggtatgcggacgatctattgaagaggacgagaagtaggctggctggcacccactctgct
cgaatggattccaatgttgtcaactcgctgcagaagcccccagagccttattttgattga
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