Corylus avellana (European hazelnut): 132163026
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Entry
132163026 CDS
T09426
Name
(RefSeq) U-box domain-containing protein 13 isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
132163026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cave04121
]
132163026
Enzymes [BR:
cave01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132163026
Ubiquitin system [BR:
cave04121
]
Ubiquitin ligases (E3)
U-box type E3
132163026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
Neurochondrin
HEAT_2
MLKL_N
zf-RING_UBOX
HEAT_EZ
Arm_2
zf-C3HC4_4
zf-Nse
KAP
MCAfunc
zf-C3HC4_2
HEAT_EF3_GNC1
zf-C3HC4
RPW8
Sec23_trunk
Motif
Other DBs
NCBI-GeneID:
132163026
NCBI-ProteinID:
XP_059429210
LinkDB
All DBs
Position
ca10:complement(18087500..18094333)
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AA seq
662 aa
AA seq
DB search
MEEEKGALAQSLIDIVNEIASISEYRCTVKKQYCNLARRLKLLTPMFEEIRDSKEAVPEE
TVRALVSMKEALKSAKELLKIGSEGSKIYLVLEREPIMTKFHEVTARLEHALSGISYENI
DISDEVKEQVELVLAQFRRAKGRVDSPDVELYADLLSLYNKTNDASTDPAVLKRLAEKLQ
LMGINDLTQESLALHEMVTASGGDPGESIEKMSMLLKKIKDFVQTENPNMDAPAREKSLP
PSCSGQASTDKNHKAPVIPDDFRCPISLELMKDPVIVSTGQTYERTCIEKWLEAGHGTCP
KTQQTLSSTALTPNYVLRSLIAQWCEANGIEPPKRPSSSRPNKTSACSPAERTIIEVLLR
KLASNNPEDQRSAACNIRLLAKRNADNRVAIAEAGAIPLLVSLLSTPDSRTQEHAVTALL
NLSICEDNKESIISYGAVPAIVHVLKKGSMEARENAAATLFSLSVVDGNKITIGASGAIP
PLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLMRLLTEAGGGMVDEALA
ILAILASHPEGKATIGAAEAVPVLVEVIGSGSPRNRENAAAVLVHLCAGDQQHLAEANDL
GVMVPLADLAQNGTDRAKRKAAQLLERMTRFLDQQQEAQAQAEALAQTQQSQPPSTINPD
DG
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagaaaggagctttggcgcagagcctgatcgacatagtgaacgagatagct
tcgatctcggagtacaggtgtacggtcaagaagcagtactgcaatttggcgaggaggttg
aagctgttgaccccaatgttcgaggagatcagggacagcaaagaggccgtcccggaagag
accgtgagagctctggtttcgatgaaggaggctctgaaatcggccaaggagttgctcaaa
atcgggagcgaagggagcaagatttacctggtcctagagagggagccaattatgactaaa
tttcatgaggtgacagctcgactggaacatgctttgagcggaatttcctatgaaaatatt
gacatatcagatgaagttaaggaacaggttgagcttgttcttgctcagttcagaagagcc
aaaggaagggttgattctcccgatgttgagctgtatgcggatcttttatctctttacaac
aagacgaatgatgcatcaacagatccagctgtcctaaagagattggctgaaaagttgcaa
ttaatgggaataaatgaccttacacaagagtcactggctttgcatgagatggttactgcc
agtggaggagatcctggggagagcattgagaagatgtcaatgctactgaagaaaatcaag
gattttgtgcaaacagaaaaccctaacatggatgctcctgcaagagaaaaaagtcttcct
ccaagctgcagtggacaagcatccacggacaaaaatcataaggccccagttataccagat
gatttccgctgtccaatatccctggagttgatgaaggatcctgtcattgtctcaacaggg
cagacctatgaacgtacctgcattgagaagtggctggaagcagggcatggaacatgtcca
aagacacaacagaccctctctagcactgccctgacgccgaactatgttttacgtagtctc
atagcccagtggtgcgaggcaaatggcattgaaccaccaaaacgacccagtagttctaga
cccaataaaacatctgcctgttcacctgctgaacgtactataattgaagttctcctacgc
aagctcgcatccaacaaccccgaagaccagcgatcggctgcctgtaatatccgccttctt
gctaagcgcaatgcagataaccgtgtggccattgctgaagctggcgcaatccctctcctt
gttagccttctttcaacacctgattcccgtacccaagagcatgctgtgactgcgctactt
aacctctccatatgtgaggataataaagaaagcatcatatcctatggggcagttcctgct
atagttcacgtgctcaagaaggggagcatggaagctcgggaaaatgcagcggctaccctt
ttcagcctttctgttgtggatggaaataagatcacaattggtgcttctggagccatccca
ccccttgtaacactactgagtgaaggaacccaaaggggtaagaaggatgctgcaacagca
ctgttcaacttgtgcatttaccaagggaacaagggaaaggcaataagggctggtgttatt
cccacactcatgcggctgctaacagaagcaggaggtggaatggtggatgaggcacttgcc
attttagcgatactggctagccatcctgaaggtaaagctaccattggagctgcagaggca
gtgccagtattggtagaggttattgggagtggatcccccaggaatagagagaatgcagct
gccgttttggtacacctttgtgctggagaccagcaacatcttgcagaggccaatgatctt
ggagtgatggttccactggcggatttggcacaaaatggcacagatagggccaagcgaaag
gctgcacagttgctagagcgtatgactaggtttcttgaccaacagcaggaggctcaggca
caagccgaggcactagctcagacacagcagtcacagccaccctccacaataaatcccgat
gatggctga
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