Corylus avellana (European hazelnut): 132163242
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Entry
132163242 CDS
T09426
Name
(RefSeq) protein CHROMATIN REMODELING 5 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132163242
03036 Chromosome and associated proteins [BR:
cave03036
]
132163242
Transcription machinery [BR:
cave03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
132163242
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
132163242
SLIK complex
132163242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Helicase_C
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Chromo_MIT1
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
132163242
NCBI-ProteinID:
XP_059429432
LinkDB
All DBs
Position
ca10:3030909..3057438
Genome browser
AA seq
1765 aa
AA seq
DB search
MAFFRNYSNETVSQSVLEEKGQGQSVNRTCSTVVNEDLDATSSEKEFDMNMDAQYQSEGE
LNDANRLQNEGAANGSVNMRASNLQPSGRRTGVAGKWGSTFWKDCQPMTGGGSDSGQDSK
SGSDYRNAEASEDNSLDGREDRLESEDDNRQKDVGKGQRGHSDVPADEMLSDEYYEQDGE
EQRDTLHYTGLNSRPQSKPVANSNHVKRNSRVLNDNEDGDNDDKNDDADVDADYEEEDEE
DEDDPDDADFEPDSGVTSGRTGNKDKDWNGEDSDEDGDGGDDLEVSDEDDSYFTKKPKGR
QQVKGGRNVGSTRDRVSFRASSRQRRVKSSFEEDESSAEDSDSVSEEDFKSMTRRGVNLR
KNGGRSTVSTNASGRHSEVRTSSRSVRKVSYVESEESEEVDEGKKKKSHKEEIEAEDSDS
IEKVLWHQPKGVSEDAIRNNRSTEPVLLSQLYDTEPDWNEVEFLIKWKGQSHLHCQWKSI
SELQNLSGFKKVVNYTKKVMEDVRYRMAVSREEIEVNDVSKEMDLDLIKQNSQVERIFAD
RINKDSSGNVVPEYLVKWQGLSYAEATWEKDVDIAFAQDAIDEYKAREAAMAVQGKMVDF
QRKKSKASLRKLDEQPEWLKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSV
SMLGFLQNAQQIYGPFLVVVPLSTLSNWAKEFRKWLPDLNVIIYVGTRASREVCEQYEFF
NDKKVGRPLKFNALLTTYEVVLKDKAVLSKIKWSYLMVDEAHRLKNSEAQLYTTLSEFST
KNKLLITGTPLQNSVEELWALLHFLDPEKFKSKDDFVQNYKNLSSFNENELANLHMELRP
HILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIV
VELKKCCNHPFLFESADHGYGGDSRTNDSSKVERIVLSSGKLVILDKLLVRLHETKHRVL
IFSQMVRMLDILAEYMSLRGFQFQRLDGSTKAELRHQAMDHFNAPGSEDFCFLLSTRAGG
LGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKK
KMVLDHLVIQKLNAEGRLEKKEAKKGSYFDKNELSAILRFGAEELFKEDKNDEESKKRLL
SMDIDEILERAEKVEEKEPGGEQGNELLSAFKVANFCAEDDGSFWSRWIKPDAVAQAEEA
LVPRAARNTKSYAEANQPGMSNKRKKKGPEPQERMQKRRKADYSVPAVPMIEGAACQVRR
WSYGNLSKRDALRFSRAVMKFGNQSQISLIAVEVGGAVGAAPPEAQIELFDALIDGCREA
VEVGNLDPKGPVLDFFGVPVKANDLLTRVQELQLLAKRISRYDDPIAQFRVLMYLKPSTW
SKGCGWNQIDDARLLLGIYYHGFGNWEKIRLDERLGLVKKIAPVELQHHETFLPRAPNLR
DRANALLEMELVALGKRANAKVGRKASKKERDNLLNISVSRGRDKKGKAGSQKVTVQMNK
ERRQKPTKVEPLVKEEGEMSDNEEVYEQFKEVKWMEWCQDVMVGEMKTLERLQRLQIISA
NLPKEKVLMKIRNYLQLLGRRIDQIVLEHEEEPYKQDRMTMRLWNYVSTFSNLSGERLHQ
IYSKLKQEQEEEAGVGPSHLNGSAPGPIGRDSDTNYFPPFPRHVERQRGYSNMSTYQASE
PVQKGHDTAKFEAWKRRRRAETDNHFQVQPPSVRSMSNGARLSDPNSLGILGAGPSENRR
FAGEKPFRMRQTGFPPRQGFSSGIK
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atggctttttttaggaactatagtaatgaaactgtttcacagagtgtcctggaagaaaaa
ggccagggacagagtgtcaacagaacttgtagcacggtagtgaatgaggatttagatgcg
acttcgagtgagaaagaatttgatatgaacatggatgcacagtatcaaagtgaaggtgaa
ctgaatgatgccaataggctgcaaaacgagggagctgctaatggcagtgttaatatgaga
gcgtcaaatctgcaaccttctggaaggagaacaggggttgccggaaaatggggttcaacc
ttttggaaggactgccaacccatgactgggggtggctctgattctgggcaggattccaaa
agtgggtctgactatagaaatgcagaggcgtcagaagacaattcattggatggcagggaa
gatagattggagtcagaagatgacaataggcaaaaggatgtgggcaagggtcagaggggc
cattctgatgtccctgcagatgagatgttatctgatgaatattatgagcaggacggggaa
gaacagagagacacgttgcattatacaggattgaattctaggccacaatcaaaacctgtt
gctaacagtaaccatgtgaaaaggaattccagagttttaaatgacaatgaagatggtgat
aatgacgacaaaaatgatgatgccgatgtggatgctgattatgaagaagaggatgaggaa
gatgaggatgatcccgatgatgcagacttcgagcctgattctggtgtcacgagtggtcgc
acagggaacaaggataaagactggaatggtgaagattctgacgaagatggtgatggtggt
gatgatttagaagtttcggatgaagacgattcctattttacaaagaaacctaagggtagg
caacaagttaaaggaggacgtaatgtagggtccactagagatcgtgtatcatttcgtgcg
tctagtcgacaaagaagagtgaaatcatcatttgaagaggatgagtcttcagcagaggac
tctgacagtgtcagtgaagaggattttaaaagcatgaccaggagaggtgtaaatctccgc
aaaaatggtggtcgatccactgtgtcaacaaatgcatctggacgacacagtgaggtccgc
acttctagtaggtcagttcgaaaggtgtcatatgttgaaagtgaagaaagtgaagaagtt
gatgaaggcaagaagaaaaagtcccacaaggaggagattgaagcggaagacagtgactcc
attgagaaggtactgtggcatcagccaaaaggcgtgtctgaagatgctataaggaataat
agatcaacagaacctgttctgttaagccagttgtatgatactgagccagattggaatgag
gtggaattcttgataaaatggaaaggccaatcacatttgcactgtcagtggaagtcaatc
tctgagctgcaaaatcttagtggttttaagaaggttgtaaattacacaaaaaaggtgatg
gaggatgttaggtacaggatggcggtctcacgtgaggagattgaggtaaatgacgtgagc
aaggagatggacttagatctcatcaagcaaaacagtcaggtggagagaatatttgcagac
cgaatcaataaagatagttctggcaatgtggtaccagagtatttagtcaagtggcaaggg
ctatcttacgctgaagcaacatgggaaaaggatgtagatatcgcgtttgctcaagacgcc
attgatgaatacaaggctcgtgaagctgcaatggccgtacaaggaaaaatggtggatttc
caacgtaagaagagcaaagcaagcttaaggaagcttgatgaacagcctgaatggttgaaa
ggaggaaagctacgtgattatcagctcgagggtttgaattttcttgttaacagttggagg
aatgatacaaatgtcatcttagctgatgaaatgggtcttgggaaaactgttcagtcagtt
tccatgcttggctttttacagaatgcccaacagatctatgggccttttcttgttgttgta
ccattatccactttgtcaaactgggcaaaagaatttaggaagtggcttcctgatttgaat
gtaattatatatgttggcacccgtgcaagcagagaggtttgtgagcaatatgaatttttc
aatgataaaaaagttggcaggcctttaaaattcaatgcgctattgactacatacgaagtt
gttctgaaggataaggctgttctctccaagattaagtggagctacctgatggttgatgaa
gctcataggttgaagaatagcgaggcacagttatacacaactctttcggagtttagcacc
aagaacaaattacttattactggcactccgttacaaaatagtgtggaagagctttgggct
ctgcttcacttccttgaccctgagaagttcaagagtaaggatgattttgttcagaattac
aagaatctcagctcattcaatgagaatgagcttgctaatcttcatatggagttgaggcct
catattctccgaagagttataaaggatgtagagaagtctttgcctccaaaaattgagcgt
attcttcgtgttgaaatgtccccccttcagaagcagtactacaagtggattttggaacgc
aattttcatgacttgaacaaaggagtccgagggaatcaggtttcacttttaaatattgtg
gtagagttgaagaaatgttgcaatcatcccttcctgtttgaaagtgcggaccatggttat
ggtggggactcaaggacaaatgatagcagtaaagtggagagaattgttttaagcagcggg
aagctagtcatacttgataagcttcttgttagattacacgagacaaagcaccgtgttctg
attttttcccagatggtcagaatgctggatatactagcagagtatatgtcacttagaggg
tttcagtttcagaggcttgatggtagtacgaaggctgagttgcgccaccaggcaatggat
cattttaatgctcctggtagtgaggatttctgcttccttctttcaactagagcaggtggc
ctgggtatcaaccttgcaacagcggacactgttataatatttgattcagactggaatccc
caaaatgacttacaggcaatgagtagagctcatagaatcggacaacaagaagttgttaac
atctatagatttgttacaagcaaaagtgttgaggaagatatcctggagcgagccaagaaa
aaaatggttcttgaccatttggtgatccaaaaattaaatgcagagggcagactggagaag
aaagaagcaaagaaagggagttactttgacaaaaatgagctgtcagctatcttaagattt
ggggcagaggaactttttaaggaagacaagaatgatgaagaaagcaagaaaaggctctta
agtatggatattgatgaaattcttgaaagagcggagaaggttgaagagaaggaacctggt
ggagagcaagggaatgaattgttgagtgcttttaaggttgccaatttctgtgctgaagac
gatgggagcttttggagtcgttggataaaaccagatgcagttgcccaagctgaagaagct
ctagttccacgtgctgcaagaaatactaaaagctatgcagaggctaatcaacctgggatg
agtaataaaaggaaaaagaaaggacctgagcctcaggagcgaatgcagaaacgccgcaaa
gctgattattcggtcccggcagtaccaatgattgagggagctgcttgtcaagtgagaaga
tggtcttatgggaatttgtctaagagagatgcattgcgtttttctcgtgcggtcatgaaa
tttgggaaccagagccaaatcagcttaatagctgtggaggttgggggtgcagttggagca
gctccgcctgaagcacagattgaactctttgatgctttgattgatgggtgtagagaagca
gttgaagtaggaaatctagacccaaagggacctgtgttggatttctttggtgttcctgtg
aaggctaatgatcttctcacccgtgttcaagagcttcaactcctagcgaagcgcattagt
cgctatgatgaccccattgcacaattccgagtgctgatgtacctcaaaccttcaacatgg
tccaaaggttgtggctggaatcagattgatgatgcaagattgcttctgggaatatactac
catggttttggcaattgggaaaagataaggttggatgaaaggcttggccttgtgaagaag
attgctccagtggaactgcaacatcatgaaacctttctaccacgagctccaaatttgaga
gaccgtgctaatgcacttctggaaatggaactagtagctcttggaaagagagcaaatgct
aaagtgggtcgtaaggcttccaagaaggagagggacaatcttctaaacatctcagtttct
cgtggccgggataagaaaggaaaggctggatctcagaaagtcactgttcaaatgaacaaa
gagagacgtcagaaacctacgaaagttgaacctttggtaaaagaagagggtgaaatgtcg
gacaatgaagaagtgtatgagcagttcaaggaagtgaaatggatggaatggtgtcaagat
gtcatggttggcgagatgaaaaccctggaacgacttcagaggttgcagatcattagtgcc
aatcttccaaaggaaaaggtgcttatgaaaattcggaattacttacagcttctaggacga
aggattgaccaaattgttttagaacatgaggaggagccgtataaacaagataggatgacc
atgcggctttggaactatgtctctaccttttcaaatctctctggggagaggcttcatcaa
atttattcaaaacttaaacaggagcaagaggaggaggcaggggtcggcccctcccatctc
aatggctctgcacctggtcctattggccgtgacagtgacaccaattattttcctcctttc
cctcggcatgtggagaggcaaagagggtacagtaatatgagtacctaccaagcatcagaa
ccagttcaaaaggggcatgatacagctaaatttgaagcatggaaacgaaggagaagagca
gaaactgataatcatttccaggttcagcccccatctgtaagatctatgagtaacggtgct
aggttatctgatccaaattcattgggcattcttggggctggaccatctgaaaacagacgc
tttgctggtgagaagccttttaggatgcgtcaaactggcttccctccgagacaaggtttc
tcatcaggtattaagtag
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integrated database retrieval system
