KEGG   Corylus avellana (European hazelnut): 132163250
Entry
132163250         CDS       T09426                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
cave  Corylus avellana (European hazelnut)
Pathway
cave03030  DNA replication
cave03410  Base excision repair
cave03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cave00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    132163250
   03410 Base excision repair
    132163250
   03420 Nucleotide excision repair
    132163250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cave03032]
    132163250
   03400 DNA repair and recombination proteins [BR:cave03400]
    132163250
Enzymes [BR:cave01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     132163250
DNA replication proteins [BR:cave03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    132163250
DNA repair and recombination proteins [BR:cave03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      132163250
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 DNA_pol_B zf-DPOE DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 132163250
NCBI-ProteinID: XP_059429443
LinkDB
Position
ca10:complement(5630834..5674182)
AA seq 2218 aa
MSGEGRWRDRRDLRSSKKQKLIRNAEEELESKLGFDLFSEGDKRLGWLLTFAPSSWEDPD
TRQVYSCVDLYFVSQDGSAFKSKYKFRPYFYAATKGKMEVEVEAYLRRRYERQIADVEIM
EKEDLDLKNHLSGLRKSYLKLSFETVQQLMNVKSDLLHVVERNQAKFDAAEAYESIITGK
REQRPQDFIDCIVDLREYDVPYHVRFAIDKDIRSGQWYDVSVSSTGLMLEKRTDLLQRAE
VHVCAFDIETTKLPLKFPDAEYDLIMMISYMVDGQGYLIINRECVGDDIEDLEYTPKPEF
EGFFKVTNVENEVELLRHWFAHMREVKPGIYVTYNGDFFDWPFLESRAAYHGLKMSEEVG
FQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF
AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMV
QAYKANVICPNKHQSDPEKFYNSHLLESETYIGGHVECLESGVFRSDIPTSFNLDPSAYE
QLINNLDRDLQYAIRVEGKLDLESVSNYDEVKNAIMEKLVRLRDEPIREECPLIYHLDVA
AMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGETFMAKKSDYYHLKK
QIESEFVDRAEGQLSKSFLDLPKTDQQSRLKERLKKYCQKAYKRVLDKPVTELREAGICM
RENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDLVVLYDSLQLAH
KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCVL
PGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLSDPINKIYKTHSECSI
EFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEL
FDKFLHGSTLEECYSAVASVANRWLDLLDNQGKDVVDSELLDYISESSTMSKSLVDYGEQ
KSCAVTTARRLADFLGDTMVKDKGLRCQYVVACEPKGTPVSERAVPVAIFETDAEIMKFY
VRKWCKISSDVGIRSIIDWSYYKQRLSSSIQKIITIPAAMQKVVNPVPRVVHPDWLHKKV
REKEDKFRQRKLVDMFSSLNRNGLLKKNIDAVETNSLMNEKIVEDLEDFRNKSSSSINGP
RPIVRTYEVNNGQHSAKTNGQVGSLQQQTDHSENVLQESLPLQENARSSENIDRNVDYRG
WLELKKRKWKDNLERRKRQRLSNSRTPLRGNGVSELLGSGINQKDTQGRSGVSSYFRRPE
VALTRCHWQIIQLVPSSENGQFFAWVAVEGIMLKIPMTVSRVFYLNSKAPVTEEFLGRRV
NKILPHGRHSYNLYEVIINEDQFRKYSKKLAALLADPEVEGIYETKVPLEFNAILQIGCV
CKVDKTAKKRNVQDGWSLSELHMKTTTECSYLEQSISFFYLYHSISEGRAIYIGYFPASR
TISVLVVNPYQNKDLSPSFLEKQFREACQAVSVEPPPPSNGVIVKVDYVGYVKDAEKILQ
RAINEHKHEHHGPTIAVIECPNAQSMKLGIRALDDFPCVNIPSNARDSHYQVLGWQQVAA
KIGMQRCAASSLWLNERISLSRYAHVPVGNFELDWLIFTADIFFSRALREQQQLLWISDD
GVPDLGGINEEDTCFADEVHQPVLTYPGAYRKITVELKIHHLAVNGLLKSNQVNEMEGGA
LFGYDQEMNSGAHVLNEQGGIDEDTSCAPAFRVLKQLIQRCLADAVTFGNVYADAILQHL
YRWLCSPQSKLHDPALHRILHKVMVKVFALLLAEFRKLGATIVFANFSKVIIDTGKFDLS
AAKAYCDSLLKTIQTRDLFEWIELEPQNFWHSLLFMDQYNYGGIPAKADDIIHEESEVDI
VSSWNIAEYLPKKIQDHFVFIVSQFMYIPWSYARKQAAIRTSLPDGNSCTPSVTVTAAES
FESHMTEYLKGQISSYFTDKLLGIVRDTILHMKGMNRTENDQHISSGLPQVTDKIHKGDA
ALEFIKHVCAVLALDQNVQHDVLVMRKNLLKYVHVREFAPEAEFHDPCPSFILPNVICSY
CNDCRDLDLCRDSALLAQEWRCAVPQCGQPYDGEIMQNALLQIVRQRERLYHLQDLVCLR
CQQVKAAHLAEQCACAGSFRCKEDLSEFRSKMQVFLNIAIHQKFQLLQECTSWILELR
NT seq 6657 nt   +upstreamnt  +downstreamnt
atgagcggcgaaggtagatggcgcgaccgccgagacctgcggagctcaaagaagcagaag
ctaatacgcaacgctgaggaggagctagagtcgaagctgggtttcgatcttttctccgaa
ggcgacaaacggcttggatggttgctcactttcgcgccctcatcttgggaggatccagac
acccggcaagtctatagctgtgttgatctttattttgtttcacaggatggttctgctttc
aaatcaaaatacaaattccgaccttatttctatgcagccacaaagggaaaaatggaagta
gaggttgaagcatatttgagacgacgctatgaaaggcaaattgctgatgttgaaatcatg
gagaaagaagaccttgaccttaaaaaccatttgtctggcttgcgcaaatcttatttaaag
ctatcttttgaaactgttcaacaattaatgaatgtgaagagcgacctattgcatgttgtt
gaaagaaaccaggcaaaatttgatgctgcagaagcatatgaatccataataacaggaaaa
agagagcaaagacctcaagattttatagactgtatagttgatctccgcgagtacgatgtt
ccctaccatgttcgctttgccattgacaaggatatacgaagtgggcagtggtatgacgtt
agtgtatccagtactggtcttatgcttgagaagaggacagatcttttgcaacgtgctgaa
gtgcatgtttgtgcatttgatattgagaccacaaagcttcctttgaaatttcctgatgct
gaatacgatttaataatgatgatctcatacatggttgatgggcaagggtacttgattatt
aacagagagtgtgttggagatgatatagaggacttggagtacactccaaaaccagaattt
gaaggattttttaaagtgacaaatgtggaaaatgaggtagagcttcttagacattggttt
gcccatatgcgagaggtgaagcctggtatttatgtcacatacaatggtgatttttttgac
tggccattcttggaaagcagagcagcctatcatgggttgaaaatgagtgaagaggtagga
tttcaatgtgacaagaatcagggggaatgccgtgctaaatttgcttgccatctagattgt
tttgcttgggtcaaacgtgatagttatctccctcaaggaagccaaggcctaaaggctgtt
actaaagcaaagttgggttatgatcccctggaggtgaatcctgaggacatggttcgcttt
gcgaaagaaaaacctcagatgatggcctcctattctgtttctgatgctgttgcaacttac
tacttgtacatgacctatgttcatcccttcattttctctcttgctactattatacccatg
tcgccagatgaggttttacgcaaaggtagtgggaccctttgtgaaatgcttcttatggtt
caggcatacaaggctaatgttatctgccctaacaaacaccaatctgacccagagaagttt
tacaatagtcaccttcttgagagtgagacatatataggtggccatgtggaatgccttgaa
agtggagtttttagatctgatattcctactagtttcaaccttgatccatctgcctatgag
caactgatcaacaaccttgaccgggatttgcaatatgctataagagtagagggtaagctg
gacttggaatcagtgtccaattatgatgaagtgaagaatgctataatggaaaagcttgtc
agattgcgagatgaacctattcgtgaagaatgcccccttatttatcatcttgatgtagct
gcaatgtatccaaacattattttaacaaacaggcttcagccaccatcaatagttacagat
gaggtctgcactgcatgtgatttcaaccgtccaggcaaaacttgtctacgaaagcttgaa
tgggtttggcgtggagagacattcatggcaaagaaaagtgactattaccatttgaagaag
caaattgagtcagagtttgttgatcgtgccgaaggtcagttgtcaaaatcttttcttgac
ctaccaaagacagaccaacagtcaaggctaaaagagcgtctgaagaaatactgtcagaag
gcttataaacgggtacttgacaagccagttactgaactccgagaagcagggatctgcatg
cgggaaaacccattttatgttgacactgttcgtagctttcgggacagaaggtatgaatac
aaagggcttaacaaggtttggaaagggaagttgtcagaagccaaggctagtggaaattct
ataaaaatccaggaagcacaagatttggtagtgctttatgattcattacaacttgctcat
aagtgcatacttaattcgttctatggatatgtcatgcgcaagggtgcaagatggtactcc
atggaaatggctggagtagtgacatatacaggagcaaaaataattcagaatgctcgcttg
ttggttgaaaaaattggaaagccacttgaattagatacagatggtatctggtgtgtgctc
cctggatcttttccggagaactttactttcaaaaccaaagacttgaagaagaagctgaca
atttcatatccgtgtgttatgcttaatgttgatgtggctagaaacaatacaaatgatcaa
taccagacactatcagatcctatcaacaaaatatataaaactcatagtgaatgctcaatt
gaatttgaagtggatggaccatacaaggcaatgattcttcctgcgtctaaggaagaagga
atcctaattaagaagcgttatgctgtttttaatgatgatggaacccttgctgagcttaaa
ggttttgagatcaagcgtagaggtgagctgaagctcatcaaagttttccaggctgagctc
ttcgataagtttctccatggatccaccctagaggaatgctattcagctgtagcttctgtc
gcaaaccgctggcttgatcttcttgataatcaaggaaaggatgttgtggacagtgagctg
cttgattacatatcagaatcaagcactatgagcaagtccttagttgactatggtgaacaa
aagtcatgtgcagtgaccacagcaagacgccttgctgattttcttggtgatacaatggtt
aaagataagggactccgctgccagtatgtcgttgcatgtgaacctaaaggaacacctgta
agtgagcgtgctgttcctgttgcaatatttgaaactgatgctgagataatgaagttttat
gtccggaaatggtgcaagatttcatcagatgttggcattcgatccattattgactggtct
tattacaagcagaggcttagttcatcaattcagaaaattattaccattcctgcagcaatg
caaaaggttgtgaatcctgttcctagggtagtccatcctgattggctgcataaaaaggtt
cgtgagaaggaggacaagtttcgacaacgcaaattagttgatatgttcagctcattgaac
aggaatggtttgttaaaaaagaatattgatgctgttgaaaccaatagtttgatgaatgaa
aaaattgtcgaagatttggaagacttccgaaacaaaagcagcagttctataaatggacct
agacctattgttcgtacctacgaagttaataatggacaacattcggccaagacaaatggc
caagtaggctccctgcaacaacaaactgatcatagtgaaaatgtgcttcaagagtctcta
ccgttacaagaaaatgctcgctcttctgaaaatattgacagaaatgttgattatcgggga
tggcttgaactgaagaaaagaaagtggaaagataatttggagaggaggaagaggcaaaga
ttgagcaattcacggactccactccgtggtaatggtgtttctgaactgctgggtagtggg
ataaatcagaaagatactcagggcagatctggtgtcagttcatactttaggaggcctgaa
gtagccctaacacgctgccactggcagattatacagctagttccaagttcagagaatggc
caattttttgcctgggttgctgtagaaggaatcatgcttaagattcctatgactgtttct
agagtattttacctcaactcaaaagcacctgtaacagaagaatttctgggaaggcgtgta
aacaagattcttcctcatggaaggcatagctataacttgtacgaggttatcatcaacgaa
gatcaatttagaaaatatagcaaaaagcttgcagccctccttgcagaccctgaagttgag
gggatatatgagacaaaggtgccattggagtttaatgctatactccagattggttgtgta
tgtaaggtggacaaaacagctaagaaacgaaatgttcaggatggctggagtctgagtgaa
cttcacatgaaaactacaacagaatgttcttatctggaacaatctatctctttcttttac
ttgtatcacagcatctctgaaggccgagctatctatattgggtattttcctgcatcaaga
acaatatctgttttggtggttaatccttatcaaaataaagatttatcaccgtcatttctt
gagaaacaattccgtgaagcttgccaagctgtttctgttgaaccacctcctcccagtaat
ggtgtcattgtcaaggtggattatgttggctatgtcaaggatgctgaaaagattttgcaa
agagcaataaatgagcacaaacatgaacatcatgggcctacaattgctgttattgaatgc
ccaaatgctcaatcaatgaagttaggcatacgagctctagatgatttcccatgtgtgaac
attccttccaatgctcgtgatagtcactatcaggttcttgggtggcaacaagtggctgca
aaaattggaatgcaacggtgtgcagcatcctccctgtggttgaatgagagaatctctctc
tcaagatatgcccatgtaccagtagggaattttgaacttgactggctcatttttacagca
gatatcttcttttcaagagcattacgtgagcagcaacagttactttggatatctgatgat
ggtgttccagatctgggaggcattaatgaagaagatacctgttttgctgatgaagtccat
caaccagtccttacatatcctggcgcatatagaaaaataactgtggagctaaagattcat
cacctagctgtaaatggtcttttgaaaagcaaccaagtgaatgaaatggaaggtggtgct
ttgtttggatatgaccaggagatgaattctggagcacatgttctaaatgaacagggtggc
attgatgaggatacctcatgtgcacctgcattccgtgttctgaaacaattgatccaaagg
tgccttgctgatgcagtcacatttggaaatgtatacgctgatgcaatattgcaacatcta
tatcgatggctctgcagtccacaatcaaaacttcatgacccagctcttcaccgcatactt
cacaaggtgatggtaaaggtgtttgcactattgttggcagagtttcggaaattgggtgcc
acaattgtttttgcaaacttctcgaaggttattatagacacaggcaaatttgatctctct
gctgccaaagcttactgtgatagcttgcttaaaacaatacaaaccagagaccttttcgag
tggattgagcttgagccacagaacttctggcattccctgcttttcatggatcagtataat
tatggtggaattccggccaaagctgatgatatcatacacgaggaatctgaagtggatatt
gtgtcgagctggaatattgctgaatacttacccaagaaaattcaggaccattttgttttt
attgtctctcagtttatgtatattccctggagctatgcacgaaagcaagctgcaataaga
acctctttgccagatggcaactcatgcaccccatcggtaactgttacagctgctgagagt
ttcgaatcacatatgacagaatatcttaaagggcagatcagctcttacttcacagacaaa
cttctgggtattgttcgcgataccattcttcatatgaaggggatgaacagaactgaaaat
gaccagcatatatcttccgggctcccacaagtcactgataaaatccacaaaggggatgct
gcgctcgagttcattaagcatgtctgtgctgttctggccctagaccaaaatgttcaacat
gatgttctggtcatgagaaagaatctgttaaaatatgtacatgtgagagagtttgctcca
gaagctgagtttcatgatccttgcccatccttcatcttaccaaatgtcatttgcagctac
tgcaacgactgcagagacctggacttatgccgtgactcagctttactggctcaggagtgg
cgctgtgctgtgccacaatgtggccagccttatgatggtgagatcatgcagaatgctctt
cttcaaatcgtacgacagagagaacgtctctaccacttgcaggatctggtgtgccttcgg
tgccaacaggtgaaagctgcacatttagccgagcaatgtgcatgtgctggctcatttagg
tgcaaagaagatttgagtgagttccggagtaagatgcaggttttcttgaacattgctatt
catcagaaatttcaacttctccaagagtgtacctcatggattttagaacttcgataa

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