Corylus avellana (European hazelnut): 132163291
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Entry
132163291 CDS
T09426
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132163291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132163291
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
132163291
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
132163291
NCBI-ProteinID:
XP_059429507
LinkDB
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Position
ca10:13498511..13506208
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AA seq
257 aa
AA seq
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MAGKPGTNPTTYSPSMATGKTRTPIFKDHDVDWVRPDGRGFHQCRPAFFRTGAVNSASGS
AYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSYTTFATPVRGQGSDYKEFSSMLH
KALEGAIILETFPKTTVDVFALVLESGGSDLHVVISCASLALADAGILMYDLVASVSLSS
LGKNLVIDPVLEEESYQDGSLTITCMPSRYEVTQLSITGEWSTPKINEGMQLCLDACSKL
AKIMRSCLKEATSTSQE
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggccgggaaacctggaacgaacccgacgacttactcgccgtcaatggcgacgggtaaa
acccgtacgcccatcttcaaagaccacgacgttgattgggtccgaccggatggtcgcggc
ttccaccagtgccggcccgccttttttaggactggtgctgttaattctgcttcaggatct
gcttatgcggagtttggaaatactaaggtcattgtgtctgtatttgggccaagagaaagt
aagaaggcaatgatgtacagcgatattgggcggctaaattgtaatgtcagctatacaact
tttgccaccccagtccgtggacagggatcagactacaaagagttttcctcaatgcttcat
aaagctttggagggtgcaataattttggaaactttccccaagactactgtagatgttttt
gcgttggtgctggaatctggtggcagtgatcttcatgttgtcatatcatgtgccagtctt
gccctagcagatgccgggattttgatgtatgaccttgttgcctcagtttctttgtcttct
cttggtaagaacctcgtcattgatcccgttttggaagaggaaagctaccaagacggaagc
ttaacgattacatgtatgccttctcgatatgaggtcactcagctttctattacaggggag
tggtcaaccccaaaaattaacgaggggatgcagctatgcctggacgcctgctcaaagctt
gcaaagatcatgaggtcttgtttgaaagaagccacttccacttcacaggagtag
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