Corylus avellana (European hazelnut): 132163295
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Entry
132163295 CDS
T09426
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 2-like isoform X1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132163295
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cave01009
]
132163295
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132163295
03019 Messenger RNA biogenesis [BR:
cave03019
]
132163295
03041 Spliceosome [BR:
cave03041
]
132163295
Enzymes [BR:
cave01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
132163295
Protein phosphatases and associated proteins [BR:
cave01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
132163295
Transcription machinery [BR:
cave03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
132163295
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
132163295
Spliceosome [BR:
cave03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
132163295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
132163295
NCBI-ProteinID:
XP_059429510
LinkDB
All DBs
Position
ca10:complement(19468269..19472808)
Genome browser
AA seq
300 aa
AA seq
DB search
MDPAVLDDIINRLLEYRQVRAGKQVQLMETEIRQLCSVSREIFLQQPNLLEIEAPIKICG
DIHGQYSDLLRLFEHGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG
NHECASINRIYGFYDECKRRFNVRLWKTFADCFNCLPVAALIDNKILCMHGGLSPDLTNL
DQIRNLPRPTDVPDSGLLCDLLWSDPSRDVKGWGMNDRGVSYTFGPDKVSEFLMKNDMDL
VCRAHQVVEEGYEFFAERQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILNKKSNFI
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggaccctgcggtactggatgacattatcaacaggctattggagtatcggcaggtgcgg
gcggggaagcaggtacagttgatggagaccgagatccgccagctctgctctgtttccaga
gaaatcttcctccagcagcctaatcttcttgagatcgaggcccccatcaagatctgtggt
gatattcatggacaatattctgatcttctgaggctttttgagcatgggggttttcctcct
aatgccaattatttattcctaggggactatgtggaccgtggcaagcagagtttagaaaca
atatgccttttgcttgcctataaaatcaaataccctgagaacttttttcttttgagaggg
aaccatgaatgtgcttcaattaatcggatatatggattttatgatgaatgtaaacgccgg
ttcaatgtaagactttggaaaacctttgctgattgttttaattgtcttcctgtggccgcg
ctcatagacaataaaatattgtgcatgcatggtggcctctcccctgatctaacaaattta
gatcaaatcaggaacttacctcgtccaactgacgtgccagattctggtttgctttgtgat
ttactttggtcggatcctagtagagatgtcaaaggctggggaatgaatgaccgtggagtc
tcttacacctttggtccagataaagtgtcagaattcttaatgaagaatgatatggacctc
gtttgtcgagcacatcaggttgttgaggaggggtatgaattctttgctgagaggcagctt
gtaacaatattctctgctcctaactattgtggcgaatttgataatgctggtgcaatgatg
agtgttgatgaaaccttaatgtgttctttccaaattcttaacaaaaagtcaaacttcatt
tga
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