Corylus avellana (European hazelnut): 132163357
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Entry
132163357 CDS
T09426
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cave03036
]
132163357
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
132163357
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
WDR55
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
132163357
NCBI-ProteinID:
XP_059429599
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Position
ca10:5319937..5329574
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AA seq
1035 aa
AA seq
DB search
MIAEKPSWIRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNMKSVSRDLGNDESTHRLLA
TLRDHFGSVNCVRWAKHGRYVASGSDDQVILIHERKPGSGTTEFGSGEPPDVENWKVAMT
LRGHTADVVDLNWSPDDSTLASGSLDNTVHIWNMSNGICTAVLRGHSSLVKGVAWDPIGS
FVASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPR
HSAPVLERGEWSATFDFLGHNAPVIVVKFNHSMFRRNSSNAQEVKSASVGWSNGASKTGG
REPQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGS
VATFHFEVKELGHRLSDAELDELKRNRYGDVRGREANLVESPAQLLLEAASAKQTPSKKV
VPDIQQKQTLIKSSLDAEVATKSEPQADDGKKSGGTAADGLNKVSTSTRISSPVKQREYR
CPDGRKRIIPEAVGVPVQQENISTAAQSQALDFPIIASDRGKDDNGLVPTEVGFKESFVR
AAVGRSSDLKERSGVTARATISESLIIEKVPVSMGKDGSINVEQSGSAKASTSLPASSTS
LSIRVFDKKGGEDALPFCLEGRPREHAASDIFGVGNTFMMKETEIICTRGPQTLWSDRIS
GKVTVLAGNANFWAVGCEDGCIQVYTKCGRRAMPTMMMGSAATFIDCDECWKLLLVTRKG
TMFVWDLYNRNCLLHDSLGSLVALNSNSSAKDAGTIKVISAKLSRSGSPLVVLATRHAFL
FDMSLMCWLRVADDCFPASNFASSWNLGSVQSGELAALQVDVRKYMARKPGWSRVTDGVQ
TRAHLEAQLASSLALKSPHEYRQCLLSYIRFLAREADESRLREVCESFLGPPTGMAENTS
SDSKNLGWDPCVLGMRKHKLLREDILPAVASNRKVQRLLNEFMDLLSEYESAETNLDEKN
TYPRTSSPMATDQRNSAPPAIDHMDSSPATMDEKDSTQLTKDQANSAPPTIDQVSSDPPL
PDQLNLVLQGKDASS
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagagaaacccagttggattagacatgaggggatgcaaattttctccattgat
gttcaacctggggggcttaggttcgctaccggtgggggtgaccataaggtccgtatttgg
aacatgaagtctgttagcagggacttgggaaatgatgaatccacacataggcttcttgcg
accctccgtgaccactttggttctgtcaactgtgttcggtgggctaaacatggtaggtat
gttgcatcagggtctgatgatcaggtgattttaattcatgagagaaagcctggttcagga
accactgagtttggcagtggagagcccccagatgtcgagaactggaaagttgcaatgact
ttaagaggacacactgctgatgtggtggatcttaattggtctccagatgattcgacgttg
gctagtgggagtttggataatactgtccatatctggaatatgagcaatggcatttgcact
gctgttcttaggggtcactctagcctggttaaaggagttgcttgggatcccattggctcc
tttgtagcaagtcaatcagacgataagactgtcattatttggcgaacaagtgattggagc
cttgctcacagaacagatggtcactgggctaaatcactcggatctacctttttcaggcgg
cttggatggtccccttgtggccattttattactaccactcacggtttccagaagccaagg
cattcggcacctgttctagagagaggcgaatggtctgccacttttgacttcttaggacat
aatgccccagttattgtggtgaagtttaatcattcaatgttcagaaggaattcctccaat
gctcaggaagtgaaatctgcatctgttgggtggagtaatggagcttctaagaccggaggc
agagaaccacagccatataatgttattgcaattgggagtcaggaccgcactataactgta
tggacgactgcaagtcctcgtcctctctttgtggcgaagcatttctttactcaaagtgtt
gtggatttatcttggagtcctgatggatattcactttttgcctgttccttggacgggtca
gtggctactttccatttcgaggtgaaagaacttggccacaggctaagtgatgctgaactg
gatgagttaaaaaggaatcgttatggtgatgtgagaggtcgagaggcaaacttagtagaa
agtccagcacagctactgcttgaagcagcttcagctaaacagacaccaagcaaaaaagtt
gtcccagacattcagcaaaagcagacgctgataaaatcttcccttgatgcagaggttgca
acaaagagtgaacctcaagctgatgatgggaagaagagtggtggaactgctgctgatggg
ttaaataaagtgtcaacttctacccggatttctagtcctgtaaaacaaagagagtataga
tgccctgatggcagaaagagaataattccagaagcagttggagtgcctgttcaacaggaa
aatatttctactgcagctcagtcccaggcactcgactttcctattattgcatctgatcgc
ggaaaggacgataatgggttggttcctactgaggttggctttaaagaaagttttgttagg
gcagcagtaggccgaagctctgatctaaaggagcgttctggagtcactgctagggctaca
atttctgagagtctcattattgagaaagttccagtctccatgggcaaagatggaagcatc
aatgtggaacagtccgggagtgctaaggcttctacttctttgcctgcttctagtacttct
ctttctatcagggtgtttgataagaaaggaggagaagatgccttacccttttgcttggaa
ggtcgacctagagaacatgctgcaagcgatatttttggggtgggaaatacattcatgatg
aaagaaacagaaattatttgcactagggggcctcaaacgctttggtctgatagaatctcg
gggaaagtcactgttttagctggaaatgcaaatttctgggcagttggatgtgaagatgga
tgcatacaggtttacacaaaatgtgggagacgagctatgccaaccatgatgatgggatca
gcagcaacatttatagattgtgatgagtgctggaagttgttgctagttacaaggaaagga
acgatgtttgtttgggatctatataaccggaactgtctccttcacgactcattgggatct
ctggttgcattgaactcaaactcatctgcaaaagatgcaggcacaatcaaagttatatct
gcaaagctatcaagatctggttctcctctggtggttctggccactcgccatgccttcctc
tttgatatgagtctcatgtgttggttaagggttgcagatgactgcttccctgcttcaaac
tttgcaagctcctggaatttgggttcagttcagagtggtgagctggctgcattgcaggtt
gatgttaggaagtatatggcaagaaagcctggttggagcagagtgaccgatggagtgcag
acacgtgctcatttggaagctcagttggcatcctctttagctttgaagtctcctcatgaa
tatcgccagtgcctcttgtcatacatacggttccttgcaagagaagcagacgagtctcgt
ttgcgagaagtctgtgagagttttcttggacctccgactgggatggcagaaaacacatct
tcagattcaaagaacctgggatgggatccttgtgtgcttggaatgagaaaacacaaactt
ctaagagaagatattcttccagcagtggcatcaaacagaaaagtccagcgattgcttaat
gagttcatggatctcctttcggaatatgagagtgctgaaactaacttggacgaaaaaaat
acctacccgcgaacatcatctccaatggcaactgatcaaaggaactctgccccgccagca
atagatcatatggactccagccctgcaactatggatgaaaaggactcgacccagctgaca
aaagatcaggcaaattctgcaccaccaacaatagatcaagttagttcagatccaccattg
ccagatcaacttaatctggtgctgcaaggaaaagatgcaagctcttga
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