Corylus avellana (European hazelnut): 132163382
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Entry
132163382 CDS
T09426
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132163382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132163382
03009 Ribosome biogenesis [BR:
cave03009
]
132163382
04131 Membrane trafficking [BR:
cave04131
]
132163382
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cave04147
]
132163382
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
132163382
Ribosome biogenesis [BR:
cave03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
132163382
Membrane trafficking [BR:
cave04131
]
SNARE
SNARE associated proteins
Others
132163382
Autophagy
Aggrephagy
Other aggrephagy associated proteins
132163382
Exosome [BR:
cave04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132163382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_28
Mg_chelatase
AAA_17
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
Viral_helicase1
NACHT
Vps4_C
AAA_7
NB-ARC
AAA_24
TsaE
DUF815
Sigma54_activat
Zeta_toxin
AAA_lid_PRS2_C
Sigma54_activ_2
Zot
Motif
Other DBs
NCBI-GeneID:
132163382
NCBI-ProteinID:
XP_059429634
LinkDB
All DBs
Position
ca10:12009963..12016177
Genome browser
AA seq
806 aa
AA seq
DB search
MAHQPESSDSKSGKKDFSTAILERKKSPNRLVVDEAVNDDNSVVALNPETMEKLQLFRGD
TILIKGKKRKDTICIALADDTCEEPKIRMNKVVRSNLRVRLGDVISVHQCSDVKYGTRVH
ILPVDDTIEGVTGSLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCV
VAPDTEIFCEGEPVRREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDAA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERISKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDESIDAEILNSMAVTNEHFHTALGTSNPSALRETVVEVPNVSW
NDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHNI
FKACLRKSPISKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSEN
PEAMDEDVDDEVAEIKAGHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFSE
TRTGASSGSDPFTAAAGGADEDDLYS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggctcaccaaccggaatcgtctgactcgaaatcggggaagaaggacttctcgacggca
attctggagcgcaaaaagtcgccgaatcggctagtggttgacgaggccgtcaacgatgac
aactcggtggtggcgctgaaccccgagaccatggagaagctacagctcttccgcggtgat
acgattctcatcaagggcaagaaacgaaaagatacaatctgcattgctcttgctgatgat
acatgtgaggagccaaagattaggatgaacaaggttgttagatcaaatctgagggttcgg
cttggagatgtcatatctgtgcaccagtgctctgatgtgaagtatgggacgcgtgtccac
atactgccagttgatgatactatagaaggtgttactggaagtttgtttgatgcatacctc
aaaccttatttcttggaggcttatcgccctgtgaggaagggagatctatttctggttaga
ggaggtatgagaagtgtagagttcaaggtcatcgaaacagacccaggggagtattgtgtg
gttgccccagacactgaaatcttctgcgagggggaacctgtcagaagggaggatgaggat
aggttggatgaagttggttatgatgatgtgggtggcgttcggaagcagatggctcagatt
cgtgaattagtggagctgccactaaggcaccctcagctttttaaatcaattggtgtgaaa
ccacccaagggaattctactttatggacccccaggttctggaaagacattaatagcaagg
gctgtagctaacgaaactggggctttctttttctgtatcaatgggccagagattatgtcc
aaattggctggggagagtgaaagcaatctccggaaagcatttgaagaagctgagaagaat
gctccgtccatcatttttattgatgaaattgattctattgctcctaagcgggagaaaaca
catggtgaagttgaaaggcgaattgtctcacaacttttgaccctcatggatggactgaaa
tctcgggcccatgttattgttattggggccacaaatcgaccaaacagtattgacgcagct
ttgagaaggtttggtcggtttgatagggaaatagacattggtgttccagatgaagttggg
cgccttgaagttcttcgcatacataccaagaacatgaagctctctgatgatgttgatttg
gaaagaatttcaaaagacacccatgggtatgttggtgccgatcttgctgctctctgcact
gaagcggcattacagtgcattagggagaagatggatgtgattgacttggaagatgaatct
attgatgctgagatactcaattccatggctgttactaatgagcacttccatactgctctt
ggaacaagcaatccatccgctttgcgtgaaacagttgtcgaagtgcccaatgtcagctgg
aatgacattggaggcctggagaatgttaagcgggagcttcaagagactgttcagtatcct
gtggagcacccagagaagtttgagaaattcggaatgtcaccttcaaaaggggtccttttc
tatggtcccccaggatgtgggaaaactctattggccaaggcaattgctaatgaatgtcaa
gccaacttcatcagtgtcaagggccctgaattacttacaatgtggtttggtgagagtgaa
gccaatgttcgagaaatttttgacaaggcccgacagtctgctccatgtgtgcttttcttt
gatgagcttgactccattgctacacagagaggaagcagcgttggggatgcaggtggtgct
gctgatcgggttctgaaccaactccttactgaaatggatggcatgtctgctaaaaagact
gtgttcataattggagccaccaacagacctgacataattgacccagcacttctgaggcca
ggtcgtcttgatcaattgatttatattcctcttcctgatgaggattcacgccataatatt
tttaaagcttgcttgagaaaatcacctatctcaaaagatgttgatttaagagcactggcc
aagtatactcaaggcttcagtggggcagacattacagagatatgccagcgagcatgcaag
tatgctataagagagaacatagaaaaggatatagagagggagaggaggcgaagtgagaat
cccgaggctatggatgaggacgtggatgacgaagtggctgagataaaggctggtcatttt
gaagagtccatgaagtatgcccgtaggagtgttagtgatgctgatatacgcaagtaccag
gcatttgctcagacattgcagcagtctaggggttttggaactgaatttaggttctctgag
acacgaactggggcctcttcaggatctgacccatttacagccgctgccggcggagctgat
gaagatgatttgtatagttag
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