Corylus avellana (European hazelnut): 132163425
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Entry
132163425 CDS
T09426
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03030
DNA replication
cave03410
Base excision repair
cave03420
Nucleotide excision repair
cave03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132163425
03410 Base excision repair
132163425
03420 Nucleotide excision repair
132163425
03430 Mismatch repair
132163425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cave03032
]
132163425
03400 DNA repair and recombination proteins [BR:
cave03400
]
132163425
DNA replication proteins [BR:
cave03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
132163425
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
132163425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_lid_RFC1
RCF1-5-like_lid
AAA_30
AAA_19
AAA_22
Rad17
PTCB-BRCT
Gp44_lid
BRCT_2
nSTAND3
AAA_assoc_2
Zeta_toxin
RuvB_N
Sigma54_activ_2
AAA_28
AAA_17
AAA_14
AAA_24
AAA_5
AAA_18
SurA_N
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
132163425
NCBI-ProteinID:
XP_059429691
LinkDB
All DBs
Position
ca10:8251308..8271015
Genome browser
AA seq
967 aa
AA seq
DB search
MSDNRQADIRKWFMKSHDKGNGKESKPATPAPANSERQVHGGQENSGRRKTSKYFATDKQ
KLKEEKETEEHLPAKRKTQKDSDESLKSPPSKKVHKVDADDDDDFVLPSSRKNSVDVTPS
KKLKLGLGRGVTQKPVDVEENDEDDDKNIETPLRSGGRGRGGRSSSAAPAGGRGRGGGRG
GFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGS
VSKKTNYLLCDEDIGGQKSKKAKDLGTAFLTEDGLFDMIGASKPAKALAQEESKKPEDTV
APLPKKSPQKIEAKKDKISNSLTTKVAGKGLISGASPAKRKTQTAEKNASTWTEKYKPKV
PSDIIGNQSLVKQLHDWLAHWNEQFVDTGNKKKGKKQNDSGAKKAVLLSGGPGIGKTTSA
KLVSQMLGFQAIEVNASDSRGKADSKIEKGIGGSNANSIKELVSNEALSINMDRSKHPKT
VLIMDEVDGMSAGDRGGIADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPT
KQQMAKRLMQVANAEGLQVNEIALEELAERVNGDMRMAINQLQYMSLSMSVIKYDDIRQR
LLTSAKDQDISPFTAVDKLFGFNAGKLRMDERIDLSMSDPDLVPLLIQENYINYRPSSVG
KDDNGIKRMSLIARAAESIGDGDIFNVQIRRYRQWQLSQSSSLASCIIPASLLHGQRETL
EQGERNFNRFGGWLGKNSTMGKNMRLLEDLHVHLLASRESSSGRKTLRVEYLTLLLKRLT
EPLRVLPKDEAVQNVVEFMNIYSISQEDFDTIVELSKFQGHPNPLEGIQPAVKAALTRAY
KEGSKSRMVRAADLISLPGMKKAPKKRIAAILEPSDDGLVDGSGELLAENEEESSSDTEE
LEGTANGEKLQLELQSLNSKGVEVKLDLKGTGNSSAKKTSAGRGKAGSGPTEKKGARGSG
TGAKRKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataataggcaggcagatataagaaagtggtttatgaagtcccatgacaagggc
aacggcaaggaatccaagcctgcaactcctgccccagccaattcggagagacaggtgcat
ggaggccaagaaaattcaggcaggaggaaaactagcaaatattttgctactgacaaacaa
aagctgaaagaagagaaggaaacagaggagcaccttccagcaaaaagaaagactcagaag
gatagcgatgaatcgctgaaatccccaccttcaaaaaaagttcacaaagttgacgctgat
gatgacgatgactttgtcttgcctagttctaggaagaactcggttgatgtgactcctagc
aagaagttgaagcttgggttgggtaggggagtcacacagaaacctgtagatgttgaagaa
aatgatgaggatgatgataaaaacattgaaactcctctgaggtctggtggaaggggtcgt
ggtggaagaagttcctcagcagcaccggctggtggaagaggcagaggtggtggacggggt
ggatttatgaacttcggagaaaggaaagatccgccacataaaggagaaaaggaagtccct
gagggcgctcctgattgtttagctggtttaacttttgtaattagtggaactcttgacagt
ctggagcgtgaagaagctgaagatttgattaaacgccatggtggccgtgttactggatct
gtcagcaagaaaacgaattatcttttatgtgatgaagatattgggggacagaaatccaaa
aaagccaaagacctgggtactgcctttctcaccgaggatggattatttgatatgatcggt
gcatcaaagcctgcaaaagcacttgcacaagaagaatcaaagaaaccagaagatacggtt
gctcctctaccaaagaaaagtccccagaagatagaagcaaagaaagataagatcagcaat
tccttgacaacgaaagtagccggcaaaggtttgatctcgggagcatccccagctaagcgt
aaaactcaaactgctgagaagaatgcttcaacatggacagaaaaatataagccaaaggtt
ccaagcgacattattggaaatcagtcgctggttaagcagctccacgactggctggcacat
tggaatgagcaatttgttgatactggaaataagaaaaagggcaaaaaacaaaatgattct
ggtgccaaaaaagctgtgctattaagtggaggccctggtatcggaaaaacaacgtcagca
aagttggtcagtcagatgctcggcttccaggcaatagaggtaaatgccagtgacagtcgt
gggaaggctgattccaaaattgaaaaaggaattggtggaagcaatgcaaattctataaag
gaacttgtgagcaatgaggccttgagtattaacatggatcggtcaaagcatccaaaaacc
gtgctgattatggatgaggttgatgggatgtctgctggagatagaggtggaattgctgac
cttattgctagcatcaagatttccaaaattcctattatatgcatttgcaatgaccgatac
agtcagaaactgaaaagtcttgtgaactactgtttgcttctcagctttcggaaacctaca
aagcaacagatggcaaagaggttaatgcaagttgcaaatgcagaaggccttcaagttaat
gagattgctcttgaggaacttgcagaaagagttaatggagatatgcggatggcaataaac
cagttgcagtacatgagcctctccatgtcggtcattaaatacgatgacattaggcagcgt
cttctaaccagtgcaaaggatcaagatatttcaccattcaccgctgttgacaagctattt
ggttttaatgcgggaaagttgaggatggatgagcggattgacctgagcatgagtgatcct
gatctagtccctcttctcattcaggaaaattatattaattataggccaagttctgttggt
aaggatgacaatggaatcaaacgtatgagcttgattgctcgtgctgctgaatctattggt
gacggggatatattcaatgtacagattcgacgatatcgacagtggcagctctctcaaagt
agttcccttgcatcgtgtattattcctgcctcgttattgcatgggcagagggaaacactt
gaacagggagagcgaaactttaatagatttggagggtggctgggaaagaactcgacaatg
ggcaaaaatatgaggcttttggaggatttgcacgttcatcttcttgcttctcgtgaatct
agttcagggaggaaaaccctacgagttgaataccttactcttcttctgaaacgattgacc
gagccactgcgagtgctgcctaaggatgaagctgttcaaaatgttgttgagtttatgaat
atttactcaattagtcaggaggattttgatactatagtggagctgtcaaaatttcagggg
catccaaatcctctggaaggcatacagcctgctgtgaaggctgctctcactagagcttac
aaagaaggaagcaaatcaagaatggtacgagctgcagatttaatctcgcttcctggaatg
aaaaaagctcctaaaaagcggattgcggcaattctagagccatcagatgatggattagta
gatggcagtggtgaactattggcagaaaatgaagaagaaagctcttcagatacagaggag
ttggaaggcactgccaatggtgagaagctgcagttggaacttcaaagtttgaattcaaaa
ggagtggaagtaaaattggatctgaagggcacaggaaattcaagtgctaagaagacatca
gctggcagaggaaaagctggttctggacctacagagaagaaaggtgcgcgaggttcaggg
actggtgccaagagaaagagatga
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