Corylus avellana (European hazelnut): 132163443
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Entry
132163443 CDS
T09426
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132163443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132163443
03110 Chaperones and folding catalysts [BR:
cave03110
]
132163443
03029 Mitochondrial biogenesis [BR:
cave03029
]
132163443
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cave04147
]
132163443
Enzymes [BR:
cave01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
132163443
Messenger RNA biogenesis [BR:
cave03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
132163443
Chaperones and folding catalysts [BR:
cave03110
]
Heat shock proteins
HSP60 / Chaperonin
132163443
Mitochondrial biogenesis [BR:
cave03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
132163443
Exosome [BR:
cave04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132163443
Exosomal proteins of other body fluids (saliva and urine)
132163443
Exosomal proteins of breast cancer cells
132163443
Exosomal proteins of colorectal cancer cells
132163443
Exosomal proteins of bladder cancer cells
132163443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
132163443
NCBI-ProteinID:
XP_059429720
LinkDB
All DBs
Position
ca10:230488..235572
Genome browser
AA seq
601 aa
AA seq
DB search
MASTFTAMSSVGSFAAPSCRVMDKKFSSSASISSCSFVRRQNVISRRNHSPKICAMAKEL
HFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELED
PVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTS
KALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAEN
SLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCQLLLVDKKITNARDLINILEEAIRGGY
PVLIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEV
GLTLDKVGKEVLGHASKVVLTKDTTTIVGDGSTQEAVNKRVAQIRNLIEAAEQDYEREKL
NERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASK
VDAIKDSLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNFKYGYNAAT
GKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEAVPAGNPMDNSGYG
Y
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaacttttacagccatgtcttcagttggctcctttgctgctcctagctgccgt
gttatggataagaaattttcatcttctgcttccatttcttcatgctcatttgttaggagg
cagaatgtgatttcacgcagaaatcactctcccaagatttgtgccatggcaaaggaattg
catttcaacaaggacggctcggctattaagaaactgcaaactggtgtgaacaagcttgcg
gatctggttggggttactcttggtccaaagggcaggaatgttgttctggaaagcaagtat
gggtccccaaaaatagttaatgatggtgttactgtggcaaaagaggttgagttggaggac
ccagttgagaacataggtgctaagttagtgagacaagcagctgccaagaccaatgatttg
gctggtgatggaaccacaacgtctgttgttcttgcacaaggtcttattgctgagggtgtc
aaggtggtagcagctggtgcaaaccctgttttaattactcgaggtattgagaagacctca
aaagctctagtgtctgagcttaagaaaatgtcaaaagaggttgaagacagtgagctggct
gatgtggcagcagttagtgctggaaacaactatgaagttggaaatatgatagctgaagcc
atgagtaaggtgggtcgtaagggtgtggtgactctagaagaagggaaaagtgctgagaac
agcctctatgttgttgaaggaatgcaatttgaccgtggttacatctcaccttactttgtc
accgatagtgagaaaatggcagttgaatatgaaaattgccagttgcttcttgttgataag
aaaataacaaatgctagagatcttatcaacattctggaggaggctattagaggtggatac
ccagttttgataattgcagaagacattgaacaagaagctctcgcaactctggttgtgaac
aagcttagaggagctctgaagattgctgcgctcaaagcccctggttttggggagcgcaag
agccaatacctcgatgacattgccattctcactggaggaactgttatcagagatgaggtg
gggcttaccttagacaaagttggcaaggaggtactcggtcatgcttctaaggtggtgctt
accaaggatactactacgattgttggtgatggaagcacacaggaagcagtaaacaagaga
gttgcacagattagaaatctaattgaggctgcagagcaagactatgagagggaaaaatta
aatgaaaggattgcaaaattgtcaggtggtgttgctgtaatacaggttggtgcacaaact
gagacagagctcaaagaaaagaaactgagagtagaagatgctctcaatgcaacaaaggct
gctgttgaggaaggtattgtagttggtggtggatgcaccttgctgagacttgcatcaaag
gttgatgccatcaaggacagccttgacaatgatgaagagaaggttggagcagatattgtc
aaaagagctttgagttaccctttgaaattgattgccaagaatgctggtgttaatggaagt
gtggttagcgagaaggtgctttccagtgacaactttaaatatggatacaacgcagcaact
gggaaatatgaagatttaatggctgctggaataattgatccaactaaggtggtgaggtgt
tgccttgagcatgcagcctcggtggcaaaaacattcttgatgtcagattgtgtagttgtt
gaaatcaaggagcccgaagcagtgcctgctggaaaccccatggacaattcaggatacggc
tactaa
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