Corylus avellana (European hazelnut): 132163634
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Entry
132163634 CDS
T09426
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132163634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132163634
03110 Chaperones and folding catalysts [BR:
cave03110
]
132163634
03029 Mitochondrial biogenesis [BR:
cave03029
]
132163634
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cave04147
]
132163634
Enzymes [BR:
cave01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
132163634
Messenger RNA biogenesis [BR:
cave03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
132163634
Chaperones and folding catalysts [BR:
cave03110
]
Heat shock proteins
HSP60 / Chaperonin
132163634
Mitochondrial biogenesis [BR:
cave03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
132163634
Exosome [BR:
cave04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132163634
Exosomal proteins of other body fluids (saliva and urine)
132163634
Exosomal proteins of breast cancer cells
132163634
Exosomal proteins of colorectal cancer cells
132163634
Exosomal proteins of bladder cancer cells
132163634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
gpW
Motif
Other DBs
NCBI-GeneID:
132163634
NCBI-ProteinID:
XP_059429982
LinkDB
All DBs
Position
ca10:complement(12771615..12775821)
Genome browser
AA seq
585 aa
AA seq
DB search
MASTNAISTASILCSPKQSLRRRVDQQKSNRLNFRQPSSRFAVRAAAKEIAFDQHSRSAL
QAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIREV
ASKTNDSAGDGTTTASVLAREIIKLGLLNVTSGANPVSIKKGIDKTVQALVEELETKARP
VKGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDR
GYISPQFVTNPEKLIAEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGE
ALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIENASIEQL
GLARKVTITKDSTTIIADAASKDELQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVA
VIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTHVPAIKEKLEDPD
ERLGADIVQKALVSPASLIAQNAGVEGEVVVEKIKNSEWEVGYNAMTDKYENLVQAGVID
PAKVTRCALQNSASVAGMVLTTQAIVVEKPRPKAPVGASPQGLTV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgactaatgctatttcaacggcatccattctctgctctcccaagcagagcttg
aggaggagagttgatcagcagaaaagtaaccgactgaatttcaggcaacccagcagccga
tttgctgtgagggctgccgcaaaggaaattgcatttgaccagcattcaaggtctgcactc
caggccggaatcgataagcttgccgatgctgttgggcttactcttggtcctaggggaagg
aatgttgtgttggatgaatttggaagtcctaaagtagtaaacgatggagtcacaattgct
cgagctattgagctccctgatgctatggaaaatgctggtgcagctctcattagggaggtt
gcaagtaaaactaatgactctgctggtgatgggacaaccactgcatcagttcttgctcgt
gaaatcattaaattaggtcttttaaatgtcacttctggtgcaaatccggtctcaataaag
aagggtattgataaaactgtacaagccttggtagaagagttggagacgaaggctaggcct
gtcaaaggtcgtgatgatatcaaagctgttgctaccatatctgccgggaatgatgagctt
attggcactatgattgcggatgcaattgacaaggttgggccagatggtgtgttgtccatt
gagtcgtcatcctcttttgagacaaccgttgaagtggaagaaggaatggagattgacaga
ggttatatctccccccaatttgttacaaaccctgagaaattgattgctgaatttgagaat
gcaagagtcttggtcacggatcagaagatttcagcaataaaagacataattcccctgtta
gagaagaccacccaattgagagccccattgcttattattgctgaggatgtcactggggag
gccttggccactcttgtagtaaataagctgcgaggcattctcaatgttgctgccattaaa
gctcctggttttggtgagaggagaaaagccctccttcaagatattgccattttgacagga
gctgagttccaagctagtgatctgggtctgcttattgagaacgcctcaattgagcagctt
ggtctggctaggaaggtaaccatcaccaaggactcgaccaccattattgcagatgctgca
tcaaaggatgagttacaagcaaggattgcacagttgaagaaggaattagcagagacagat
tcagtgtatgactcagaaaaactagctgagagaattgccaaattgtctggcggtgtagct
gtaataaaggtgggtgctgcaacagagactgagcttgaggaccgtaaactacgtattgaa
gatgccaagaatgccacttttgctgccatagaggaagggattgtgcctggtggtggtgct
gcattggttcatctttcaactcatgttcctgccattaaggagaagcttgaagacccagat
gagcggctaggtgctgatattgtgcagaaggcactggtctcaccagcatcactgatagct
caaaatgctggagttgaaggtgaggtggttgtggagaagataaagaacagtgaatgggaa
gttggttacaacgcaatgacagacaagtatgagaacttggtgcaggccggagttattgac
ccagcaaaggtgacacgatgtgcattgcaaaattctgcttcagttgcaggaatggtgctg
accactcaggctattgttgtggaaaagcctagaccaaaggcacccgtcggtgcttccccg
caagggcttactgtgtga
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