Corylus avellana (European hazelnut): 132163670
Help
Entry
132163670 CDS
T09426
Name
(RefSeq) LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cave03041
]
132163670
Spliceosome [BR:
cave03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
132163670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR
PPR_2
PPR_3
PPR_long
PPR_1
Motif
Other DBs
NCBI-GeneID:
132163670
NCBI-ProteinID:
XP_059430024
LinkDB
All DBs
Position
ca1:28081855..28085956
Genome browser
AA seq
831 aa
AA seq
DB search
MLLSYPPSATLALTSSSVLLSALSSSNAYPTNQFLSLPMCSSLSFLRSLSLSLSHHHHRG
HYFRSIFAPAFCSSPKPRKFLSLRALSRSTSVEHLACEVSRPETEELWNLSNNGDSEAAF
DFDKNVGSLDLKRLEVPALDVKELGDLPEQWRRSKLAWLCKELPAHKGGTLIRVLNAQRK
WVRQQDATYVAVHCMRIRENETGFKVYKWMIQQHWYQFDFALATKLADYMGKERKFSKCR
EIFDDIINQGRVPCESTFHLLIIAYLSAPIQGCLEEACSIYNRMIQLGGYQPQLSLHNCL
FRALVSKPGASSKQYLKQAEFIFHNLLTSGLEIHKDIYGGLIWLHSYQDTIDRERIASLA
KEMEDAGIEEGREVLLSILRACSKESDVEEAERTWLKLLRLDGGIPHLAFVYKMEVYAKV
GEPMKSLEIFREMQEKLSSTSIAAYHVIIQVLCKAQEVELAESLMIEFIKSNLKPLTPSY
IDMMNLYFNLSLHDKLELAFSQSHEKCRPNCTMYSIYLDSLVTVGNLDKAEEIFNQMRSN
GAIGVNSRSCNTILRGYLSSGDYVKAEKIYDLMCQKKYQIDSPSMEKIDYVLSLSRQNVK
KPVSMKLSKEQREILVGLLLGGLQIESDEERKNHMLRFEFRENSCIHSVLKRHIYDQYHE
WLHPSCKPSEGADDIPCRFCTISHSYFGFYADQFWPKGRPVIPKLIHRWLSPRVLAYWYM
YGGYRTSSGDILLRLKGNHEGVEKIANALKAKSLDCRMKRKGSVFWIGFLGSNSLWFWKL
IEPYVLDDMKDFLKAGVATLENSSVETQDINYDSGSELVEMASNHRDDDDS
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgctcttgagctatccgccctccgccactcttgctctcacctcctcctctgtcttgctc
tctgccctcagctcctcaaacgcttaccccactaaccaattcctctcccttcccatgtgc
tcctccctctcctttctccgctccctctctctctccctctcccaccaccaccaccgcggc
cactactttcgctctatcttcgccccagctttctgttcttccccaaagccccggaagttc
ctttctctccgtgccttgtctcgcagcacttccgtcgaacacttggcgtgcgaggtgtca
cggcccgaaacagaggagctttggaatttgagtaacaacggtgacagtgaggccgctttt
gattttgataagaatgttgggtctctggatttgaagcgcttggaggtgccggctctggac
gtgaaggagctgggagatttgccggagcagtggaggcggtcgaagctggcgtggctgtgt
aaggagctgccggcgcataaaggtgggacgctgattcgggtactcaacgcgcagcggaag
tgggtaaggcagcaggacgccacctatgtcgccgtgcattgtatgcggattcgcgagaat
gagactggctttaaggtgtacaaatggatgattcaacaacattggtatcagttcgatttt
gctcttgctaccaagttagctgattacatgggtaaggagcgtaagttctcaaaatgtcgg
gagatatttgatgatataatcaatcagggacgtgtgccttgtgaatctacattccattta
ttgattattgcctatcttagtgcaccgatccaaggttgcttagaggaagcatgtagcatt
tacaatcgtatgattcagttgggaggttaccagccccaactgagcttgcacaattgcctc
ttcagagcacttgtaagcaaaccgggagcctcttcaaagcaatatcttaaacaagctgag
tttatttttcacaatttgcttactagtggactggagatacataaggatatctatggtggc
cttatttggctacatagctatcaggacaccatagatagggaaaggattgcatcgttagca
aaggaaatggaagatgcaggaattgaggagggcagagaggtgcttttgtccatcttgaga
gcttgttcgaaggagagtgatgtggaggaagcagaacgaacttggctcaaactcctccga
ttggacggtggtatcccacatctagcttttgtgtataaaatggaagtctatgcaaaggtt
ggagaacctatgaaatctttggagatattcagggagatgcaggaaaaattgagttcgacc
agcattgcagcctatcatgtaatcatacaggttttatgtaaggctcaggaagtggaactt
gcggagtcccttatgatagaattcataaagagtaatttgaagccccttacaccatcttat
attgatatgatgaacttgtacttcaacttgagtctacatgataaattagagttagccttc
tcccagtcccatgagaaatgccgacccaattgtacgatgtacagtatatacctggattcc
ttggtgacagttggtaatcttgacaaagctgaggagatctttaatcaaatgcggagtaac
ggggcaattggtgttaactctagatcatgcaacaccattttacgtggatacttgtcttct
ggagattatgtgaaggcagagaagatatatgatctgatgtgccagaagaaataccaaatt
gattccccgtcgatggaaaagattgattatgtcctgagtttgagtaggcaaaatgttaag
aaacctgtaagcatgaagctaagtaaagaacaacgagagattttggtgggtttgctgtta
ggcggtttacagattgaatcagatgaagaaaggaagaatcatatgcttcggtttgaattc
agggagaactcctgcatacattctgttttgaagagacatatatatgaccagtaccatgaa
tggttacatccatcttgtaagccaagtgaaggtgctgatgatataccatgcagattttgt
accatctcacattcttattttggtttttatgcggaccagttttggccaaaaggcaggccc
gtgatcccaaagctaattcatcggtggctatcgccacgtgttcttgcttattggtatatg
tatgggggctacagaacttcttcgggggatattttgttgaggctgaaaggaaatcatgag
ggtgttgaaaagattgccaatgcattgaaggcaaagtccttagattgcaggatgaagagg
aagggaagtgtgttttggataggtttcctgggaagcaactccttgtggttctggaaactg
attgaaccttacgttttagatgatatgaaagattttctaaaagcaggtgttgcaacattg
gaaaacagttcagtggaaactcaggacattaattatgatagtgggtctgaactggttgaa
atggcctctaatcacagggatgatgatgattcatag
DBGET
integrated database retrieval system
