Corylus avellana (European hazelnut): 132163899
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Entry
132163899 CDS
T09426
Name
(RefSeq) uncharacterized protein LOC132163899
KO
K13095
splicing factor 1
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132163899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cave03041
]
132163899
Spliceosome [BR:
cave03041
]
Complex A
Other components
Complex A specific factors
132163899
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Ortholog
Paralog
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
KH_1
Motif
Other DBs
NCBI-GeneID:
132163899
NCBI-ProteinID:
XP_059430259
LinkDB
All DBs
Position
ca10:733477..740390
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AA seq
848 aa
AA seq
DB search
MSAKVDTTSAFEPHSTKMSGSSTSSAPTTSSPKVSMFAAKSGFVIPKNKLSGSLIPIIRG
GKKLGSGDAANEESTKLVQRKTKWGPDLTQDAAVKKGRALAYQTRLDQITQQLKLGSLEF
RDPQGSPIAAENPDPRSPSPQSNNKNSELLELEKREAIGEILKLNPSYKVPPDYKPLLKE
STVPIPVKKYPGFNLISLIFGPGGDNQKRLEKETGAKIRVYGTKAETGEKGEIKSSDGNE
IQGAYEELYVQISAETFEKVDAAVSVIELLVTSVAGNLDAVSASSTSVSGDSMDVLTQSQ
VAATSHIDPTTLVNQGVQQPMAGPTHTSLQGQFQFHSPWFPSGQSHSVMHASPGFIPSPN
SSAPLLNNPVHLSSSFMNPSNMPSLFGPRPIPAAGLNSILQNPHFLPRPQPPTQILQHPY
MAQPRPLGHIGPLRNPSMMALQPSSAQPNFSAPPPFTGSQPPPTRPGPIMGSLMASLPQP
MSSAPPGSMPDRPWTPAGSSSVWSGGPASASDSASLGLSNMGHMAPHMVPPNRSHPQNPQ
PGVASVAPPSNISTASLVSPMNFSSRPSPTQLSGAAANRPIGAPHFASNPPHQGGHPAAF
SASLHQTSAPAPAPKSSVNLVLGSASIPLHGSGVPNSVSGSAPSFTPIKPPTVSAPTSGD
FTFQPHRPHNLVSQAVPTSSRQPAIQSSQQVQLPALQVPSFQSGVPKITQPVNQVFQRPQ
FSNPVGQPQAPVSAAPYAQSPTGAHRLPAFPNANVAPRTPLSQMAPRSFSPAPQMPSLPG
PMVPRSGNPLQLQQNYPARTRPEILLAPNQQFGNTFSFASSKPPSNSGGQQIYDPFSPTS
VPTSKADG
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaaaggtcgacacaacatctgcttttgagcctcacagtactaagatgtctgga
tcaagtacttcatctgcaccaacaactagtagcccaaaggtctctatgttcgctgcaaaa
tctggatttgttattccaaaaaacaaattgtcaggctcattaattcccatcatccgagga
ggtaaaaagctaggaagtggtgatgcagctaatgaggaaagtaccaaactggtgcagagg
aaaacaaaatggggccctgatctgacacaggatgctgctgtcaaaaagggaagagcctta
gcttatcagacacgattggatcaaattacacaacagctgaaattgggatctttggagttt
agggaccctcaaggctcaccaatagcagccgagaatccagatcccaggtctccaagtcct
caaagtaataataagaactcagaattattggaacttgaaaagcgggaagctataggagaa
attttgaaactgaatccaagttacaaggtcccacctgattataaacctttattgaaagag
tcaacagttcctatccctgtcaaaaaatatcctggattcaatcttattagcctaatattt
gggcctggaggtgataatcaaaagcggttagaaaaagaaactggagccaaaatacgagtt
tatggtaccaaagcagagacaggagagaagggagaaattaaatcatctgatggaaatgaa
atccagggtgcttatgaagagttatatgttcaaatatcagctgagacatttgagaaagtt
gatgcagcggtttctgtaattgaactgctagtcacctcagtagcgggaaatttggatgcg
gtttctgcaagctctacttcagtttctggggatagcatggatgttcttactcaaagccaa
gttgcagccacctcccatatagatcctactactctagtaaatcagggagtacaacaacct
atggctggacctacacacacttctttacaaggtcaatttcaattccacagtccatggttc
ccatcaggccaatctcacagtgtaatgcatgcatctcccggcttcatcccctctccaaat
tcttcagcaccacttctcaacaatccggtccatttatcttcatcatttatgaatccttca
aacatgccttctttgtttgggcctcgaccaattccagcagctggactcaactcaattctc
caaaacccacattttctgcctagaccacagccacctacacaaattctacagcatccttac
atggctcaaccacgtcctttaggacatattggcccattgagaaatccttccatgatggct
ttacagccctcatcagctcagcctaatttttcagctccacctccatttactggtagccaa
cccccaccaacaaggccaggacctatcatggggtcactaatggcttcacttccgcaaccc
atgtctagtgctccacctggatcaatgcctgaccgaccttggacccctgctgggagctct
agtgtatggtctggaggccctgccagtgctagtgattcagcatctctaggtctgagcaac
atggggcacatggctccacatatggttccacctaacaggtctcatcctcaaaatccacaa
ccaggtgttgcatccgtggcacctccttcaaacatatcaacagccagtttggtttcacct
atgaacttttcatctaggccatcccctacccagctttcaggtgctgctgctaaccgtcct
attggagctccgcattttgcgtcaaatccaccgcatcaaggggggcatccagctgcattt
tccgcttcattacatcaaacatcagcaccagcacctgcacctaagtcatctgtaaacctt
gtattgggatctgcatcaattcctttacatggatcaggagtaccaaattctgtttctgga
agtgcaccaagcttcactcccataaaaccaccgacagtgtcagctccaacttctggtgat
tttacttttcaacctcaccggccacataatctagtctctcaagcagtacccacgtcaagc
agacaacctgctattcagagttctcagcaggtgcagcttccagcacttcaggtaccatct
ttccagtcgggtgtgcccaaaataactcaacctgtcaatcaagtctttcagaggccacag
ttcagcaatccagtaggtcagcctcaagcccctgtatctgctgctccctatgcccaaagc
ccgacaggtgcacacagacttccagcatttccaaatgcaaatgttgcgcccaggactcca
ctctcacaaatggccccaaggagcttcagtccagctccccaaatgccgagtttgcccggt
cctatggttcctaggtcggggaatcctctgcaacttcaacaaaattacccagcacgcact
aggccagagatcctattggctccaaatcaacaatttggcaacactttctcctttgcttct
agtaagccgccttctaattctggaggacagcaaatttatgatcctttttcacccacgtct
gtacctacctccaaggcagatggataa
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