Corylus avellana (European hazelnut): 132163941
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Entry
132163941 CDS
T09426
Name
(RefSeq) WD-40 repeat-containing protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03082
ATP-dependent chromatin remodeling
cave03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132163941
03083 Polycomb repressive complex
132163941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cave03036
]
132163941
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
132163941
Histone modification proteins
HAT complexes
HATB complex
132163941
HDAC complexes
Sin3A-HDAC complex
132163941
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
132163941
PRC2.2
132163941
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
132163941
Heterochromatin formation proteins
Other heterochromatin formation proteins
132163941
Chromatin remodeling factors
NuRD complex
132163941
NuRF complex
132163941
NuRF complex (fruit fly)
132163941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_RIG_1st
WD_LRWD1
eIF2A
Beta-prop_WDR19_1st
MIOS_WD40
NBCH_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
132163941
NCBI-ProteinID:
XP_059430311
LinkDB
All DBs
Position
ca1:complement(43054736..43058966)
Genome browser
AA seq
423 aa
AA seq
DB search
MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPAGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLDDAENDARHYDDDRADVGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKTLDAMQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQHLLIWDLRTPSVSKPVQSVIAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKINVALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLPEEST
KAA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagacgaggaggagatgaggggggagatagaggagaggctgataaacgaggag
tacaagatctggaagaagaacacgcccttcctctacgatctggtcatcacgcacgccctc
gagtggccttccctcaccgtcgagtggctgccggaccgagaggagcctgccggaaaagac
tactccgtgcagaagatgattctcgggacgcacacctccgagaacgagcccaactacctc
atgctcgcgcaggtccagctgcccctcgacgacgccgagaacgacgctcgacactacgac
gacgaccgcgcagacgtcggcggcttcggctgcgccaatggcaaggtgcaaataatccag
caaataaatcatgatggagaggttaatcgtgctcgttatatgcctcagaacccgtttatt
attgccactaagacagtcagtgcggaagtttatgtttttgattatagcaaacacccatct
aagcctcctctagatggtgcttgcagtcctgacttaaggttgaggggccatagcactgaa
ggatatggtttatcgtggagtaagtttaagcagggccatttattgagtggctctgacgat
gctcagatatgcctttgggatattaatgctactcctaagaacaaaacgcttgacgccatg
caaatttttaaggtgcatgaaggtgttgtagaagatgtcgcatggcatctgaggcatgaa
tatttatttggttcagttggtgatgatcaacacctgcttatatgggatctccggactcca
tcagttagcaagcctgtccaatctgttattgctcatcaaagtgaggttaactgcttagct
ttcaatccctttaacgaatgggttgtcgctacggggtctactgataaaactgttaagttg
tttgatttacgcaagatcaatgttgcactccacacctttgattgtcacaaggaggaggtt
ttccaagttggctggaatccaaagaatgagactatcttagcttcttgttgtcttggtagg
agactcatggtgtgggatcttagcaggattgatgaagagcagacaccagaggatgctgaa
gatggaccgccagagttgcttttcattcatggtgggcacacgagtaaaatatctgatttt
tcctggaacccatgtgaagattgggttgttgctagcgtagcagaagacaacatacttcaa
atctggcagatggcagagaacatctaccatgatgaagatgatttacctgaagaatctacc
aaggctgcttag
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