Corylus avellana (European hazelnut): 132164217
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Entry
132164217 CDS
T09426
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cave03036
]
132164217
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cave00535
]
132164217
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
132164217
Meiosis-specific proteins
Cohesin complex and associated proteins
132164217
Proteoglycans [BR:
cave00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
132164217
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
Myosin_tail_1
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
132164217
NCBI-ProteinID:
XP_059430650
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Position
ca10:8684380..8724352
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AA seq
1202 aa
AA seq
DB search
MYIKQVVIEGFKSYREQIATEPFSPKINCVVGANGSGKTNFFHAIRFVLSDLFHNLRSED
RHALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVCLRRTIGLKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIIQVVQYLDERLKELDEEKEELRKYQQLDKQRKSLEYTIYDKELHDARQKLA
EVEEARNKVSETSAKMYNSVLDAHEKSKDLEETLKDLTKEVQGLIKEKEAVEKRRTEAIK
KHTELELDVKDLQEKMYGSNRAKEDAMRQLETLEREIKDSMVELDKIHPFYEEQFKQEKE
ITKGIMEREKQLSILYQKQGRATQFASKAARDKWLQKEIDDLQRVLSSNLVQEEKLQDEI
RRLDTELKERDAYIESRRTEIATLDAHISQSREGFSHHKAQRDKLQNERKLLWGKESKLS
SEIDKLRTEVEKAEKSLDHATPGDVRRGMKTVKYICKEYDIRGVFGPIIELLDCDERFFT
AVEVTAGNSLFHVVVENDEISTKIIKHLNSLKGGRVTFIPLNRVRAPHVSYPQNSDVVPL
LKKLKFSPNFTPAFAQVFARTVICRDLDVATRVARADGLDCITLEGDQVSKKGGMTGGFY
DHRRSKLKFMNMIMQNKRSLNLKEKELEDVRNMLQEIDQKITELVTEQQKIDAKQAHDKS
ELEQLKQDITNANKQKQSISKALENKEKSLADVQTQIDQLRASMAMKQAEMGTELIDHLT
PEEKVLLSRLNPEIENLKKKLIKCKTDRMETETRKAELETNLTTNLKRRKQELEAIILSA
ETETLLGEAELKRQELNDAKLLVDDATQQLKRVTERIDEQTKQLRMKKDETNKLKTLEDE
YERTLQDEAKELEQLLSKRNIFLAKQEEYSKKIRELGPLSSDAFEMYKRRSIKELHKMLH
RCNEQLQQFSHVNKKALDQYVNFTEQREELQKRQAELDAGDEKIRELISVLDQRKDESIE
RTFKGVARHFREVFSELVQGGHGHLVMMKKKDGEHGDDDLDEDGPQEVDLEGRVEKYIGV
KVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMIRRLADMANTQFITTTFRPELVKVADKIYGVTHKNRVSHVNVVSKEDALDFIEQDQS
HN
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgtacataaagcaggttgtaattgaagggtttaagagctacagagagcaaatcgctact
gagcctttcagtccaaaaattaactgtgttgttggtgccaatggatctggaaaaacaaac
tttttccatgcgatacgatttgtattaagcgatctcttccataacctgcggagtgaagat
aggcatgcactgctccatgaaggtgcagggcaccaagttttatccgctttcgtggagatt
gtgtttgataattctgacaatcgcattccggttgataaggaggaagtgtgcttgcgtcga
acaattggcttgaaaaaggatgagtattttttagatggaaagcacatcacgaaaacagaa
gttatgaatttattggaaagtgctgggttctctcgctcaaatccttactatgttgtgcag
caaggaaagatagcatcattgacattgatgaaagactctgagcggctggatttactcaag
gaaattggtggcactcgagtttacgaggagagacgacgggaaagtttgaaaattatgcaa
gaaacgggaaataagagaaagcaaataattcaagttgttcagtacttggatgagagatta
aaggaactggatgaagagaaagaggaactgagaaaataccagcagcttgacaagcagagg
aaatctctagaatatactatttatgataaggaacttcatgatgcccggcagaaactggca
gaggttgaagaggcacgaaacaaagtttctgaaacatcagcaaagatgtacaacagtgtg
ctggatgcccatgaaaagtctaaagacttggaggagacattgaaagatctgacaaaagaa
gttcaaggtttaatcaaagagaaagaagcagtagaaaagcgccgaacagaagcaataaaa
aagcacacagaacttgagcttgatgtcaaagacctacaagagaagatgtatggaagtaac
cgcgcgaaagaggatgctatgagacaacttgagactctagagagggaaattaaggactca
atggtcgagcttgacaaaatacatcctttttatgaggaacaattcaaacaagaaaaggag
ataacaaaaggaataatggagcgtgaaaagcagcttagcattctttatcagaaacaaggt
cgtgctacccagtttgcaagtaaagctgctcgtgacaaatggcttcaaaaggaaattgat
gatcttcaacgggtgctttcttcaaatttggtgcaggaggaaaaacttcaggatgaaatt
cgtcggcttgatactgagttaaaagagcgggatgcctatattgagagtcgcagaactgaa
attgctactttggatgcccatatctcccagtcacgtgaagggttcagtcatcataaagct
cagagagacaagctgcaaaatgagcggaagcttttatggggcaaagaaagcaaactttct
tctgaaattgataagctgagaacagaagttgaaaaggcagaaaagagccttgatcatgca
actcctggtgatgtgaggagagggatgaaaactgtcaaatacatctgcaaagagtatgat
attcgtggggtgtttggtccaattattgagttgcttgattgtgatgaaagattttttacc
gcggttgaagttactgctggaaacagcttatttcatgtggtggtcgaaaatgatgaaata
tcaacaaagataattaaacaccttaattcattgaaaggtggacgagttacttttataccg
ctgaacagggtgagggctccccatgtatcttatccacagaattctgatgtggtacccctg
ttgaagaaattgaagttctctcccaattttactccagcatttgcacaggtttttgctagg
acggtgatttgccgtgatctggatgtggccaccagggttgctcgtgctgatggtctggac
tgcataactttggaaggtgatcaagtcagcaagaaaggtggtatgactggtggattttat
gatcacagacgctcgaaattgaagtttatgaatatgattatgcagaataaaagatctctc
aacttgaaggaaaaagagctggaagacgttagaaatatgcttcaagagatagatcagaag
ataacagaacttgttactgagcagcagaaaattgatgccaagcaggctcatgacaagtca
gaattggaacagcttaaacaggacattaccaatgctaataagcagaaacagtcgatttct
aaagctcttgaaaataaggagaaatcacttgcagatgtccagactcagattgatcagctt
agagccagtatggcaatgaaacaggctgaaatgggcacggagctcattgatcatttaacg
cctgaggaaaaagttcttctctcacgattgaaccctgaaattgaaaaccttaaaaagaag
cttattaaatgcaagacagatcgtatggagactgaaacgagaaaagcagagcttgagact
aatctaacaactaaccttaagaggcggaagcaagagttggaggccataatattgtccgct
gagactgaaactttgcttggtgaagccgaattaaagaggcaggaattaaacgatgctaaa
ttattggttgatgatgccacacagcagcttaaaagagttactgagcgtattgatgaacaa
acaaagcaactcaggatgaaaaaagatgaaacgaacaaattaaagactttggaggacgag
tatgaaaggacacttcaggatgaagctaaagaattggaacaactattaagtaaaagaaat
atttttcttgctaaacaagaagagtactcgaagaaaatcagggaattgggtccattgtca
tcagatgctttcgaaatgtacaagcggaggagtatcaaagaattgcacaaaatgctgcac
aggtgcaatgaacaactacagcagttcagccatgtaaacaagaaagcacttgaccagtat
gtaaattttactgagcaacgagaagaactccagaaaaggcaggctgaactggatgcaggt
gatgagaaaattagagaactcatatctgttttagatcagcgtaaggatgaatcgatagaa
cgtacttttaaaggtgttgctaggcacttccgagaagtattttctgaacttgtgcaaggt
gggcatggacatctggttatgatgaagaaaaaggatggagaacatggcgatgatgatctt
gatgaggatggacctcaggaagtagatttggagggaagggtcgagaaatacattggtgtg
aaagtgaaggtttcttttactgggcaaggggagacacagtccatgaagcaattgtcaggg
ggtcagaaaactgttgttgccctgacacttatatttgccatacaacgatgtgatcctgct
cccttttatctttttgatgagatagatgcagcattggatcctcagtacagaactgctgtt
ggaaatatgattcgtcgcctggcagacatggcaaatactcaatttataactacaacattt
aggccagagcttgtgaaagttgctgacaagatatatggggtgacacataaaaacagggtg
agccatgtcaatgttgtctccaaggaagatgcacttgattttattgagcaagaccaatcc
cacaattga
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integrated database retrieval system
