Corylus avellana (European hazelnut): 132164427
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Entry
132164427 CDS
T09426
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cave04131
]
132164427
04121 Ubiquitin system [BR:
cave04121
]
132164427
Enzymes [BR:
cave01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132164427
Membrane trafficking [BR:
cave04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
132164427
Ubiquitin system [BR:
cave04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132164427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
DUF3915
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
Zf_IFT144_1st
DUF3824
Atrophin-1
YxzE
Motif
Other DBs
NCBI-GeneID:
132164427
NCBI-ProteinID:
XP_059430922
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All DBs
Position
ca10:161739..164314
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AA seq
404 aa
AA seq
DB search
MEEAVAARYWCHMCSQYIDPILEVEIKCPFCQSGFVEEMNSTTIRDNQAQADVDTDTDFG
SERALSLWAPILLGMMGNQPRRRRRRFRQIEFEFGDEDDEHDNDNDHEDGHGHGHGGGET
ELDRELESIMRRRRRSSATILQLLQGIRAGMASELSENSEVDRDRERDRERDRDRDRERE
RERERLVLINPFNQTIIVQGSYDSSRGSQSENQSHIGSLGDYFIGPGLDLLLQHLAENDP
NRYGPPPAQKEAVEALPTVTVKENLQCSVCLDDFEIGAEAKEMPCKHKFHSGCIMPWLEL
HCSCPVCRFQLPADETKRDTDASRNSSNQRERESNESEIGHGNGSNEEGDGGDGRSGSGR
RFSFLWPFNGFFSSSGGGNSSSNSSSSSANSTGGGNASSQTDDN
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcagtagctgcaaggtattggtgtcacatgtgctctcaatatatcgatccc
atcctggaagttgagatcaaatgcccattttgccaaagtggatttgttgaagagatgaat
agcacaaccattagggacaatcaagcccaagcggacgtagatactgacaccgattttggg
tccgagcgcgccctctctctctgggcccctatattgctcggcatgatgggcaatcaaccc
cgtcgccggcgccgaagattcagacaaattgagttcgagtttggagatgaagatgatgaa
catgacaatgacaatgaccatgaggatggccatggccacggccacgggggaggggagact
gaattggatcgtgaacttgagtccataatgaggagaaggagaagaagctcagctactata
cttcaattgctccaaggcattcgagctggaatggcctctgaattatctgagaattctgaa
gttgatagggatagagagagggatagggaaagagatagagatagagatagagaaagagaa
agagaaagagagcgcctggttttgatcaaccctttcaatcagactatcattgttcagggt
tcttatgattccagcagggggagtcaaagcgagaatcagagccacattgggtctttaggt
gattattttattggacctggtttagatttattgctgcagcatttggctgagaatgatcca
aatagatatggtcctccacctgcacaaaaggaggcagttgaagcattacctactgtgaca
gttaaggagaacttgcagtgttcagtgtgtttggatgattttgagattggtgccgaagca
aaggagatgccatgtaagcataaatttcatagtggatgtattatgccatggctggagctt
cattgttcttgtccagtttgcaggtttcagttgcctgctgatgagaccaagcgtgataca
gatgcttctaggaacagcagtaatcagagggagagggagagtaatgagagtgaaattggt
catggtaatggtagtaatgaagagggagatggaggggatgggagaagtggaagtgggaga
aggttttcatttctatggccttttaatggtttcttttcttcttcgggtggagggaattct
tcctcaaactcctcatcttcgtcggctaattcaaccggaggtggaaatgcttcatctcaa
accgatgataattga
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