Corylus avellana (European hazelnut): 132164503
Help
Entry
132164503 CDS
T09426
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cave04131
]
132164503
04121 Ubiquitin system [BR:
cave04121
]
132164503
Enzymes [BR:
cave01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132164503
Membrane trafficking [BR:
cave04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
132164503
Ubiquitin system [BR:
cave04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132164503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
Zn_ribbon_19
zf-rbx1
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
CxC4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
132164503
NCBI-ProteinID:
XP_059431007
LinkDB
All DBs
Position
ca10:7393304..7395835
Genome browser
AA seq
334 aa
AA seq
DB search
MSRAGYTHWCYQCRLRFRLAEGERFCPRCDQGFIQELGEMEDLAPEDVFPIPADHSHQIP
DIFELMSSLMRQRGPNPRFELELVDVIDSFMRQRMAGRNPNFDVRMRSGLAPEQNWSVFG
PDPYWIFNHIPDSVFSNGSPRSGRRQVDIGDYFMGQEFEQLIEQLSTNEQRGPAPAPHSS
IDAMPTIKIAQAHIRTDSHCPVCKDKFELGSEARKMPCSHIYHSDCIVPWLVQHNSCPVC
RLELPPQGIDSARGRRSRVGGNSASSSSSNYGNNSDGLENCPQNHGRRTPWSYLWPFRSS
NSNTRHHAESRGSNSSATHEQNNEMSYSGRPFEY
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtgctggatacacgcactggtgctaccaatgcaggctgcgattcaggcttgca
gagggagaacgtttttgccctcgctgtgatcaaggctttattcaagaacttggtgagatg
gaggacttggcaccagaagatgtctttcctattccagcagatcattctcatcaaatacct
gatatatttgaacttatgtctagtttgatgaggcagagaggtcctaacccaagatttgaa
cttgaacttgtggatgttattgattcttttatgaggcaaagaatggctggaagaaaccct
aattttgatgttagaatgagatctggtttggctcctgaacagaattggagtgttttcggt
cctgatccatattggattttcaatcatattcctgattcagtcttctctaatggcagtcca
agaagtggccgtaggcaagttgatatcggtgactactttatgggccaagaatttgaacaa
ctgattgaacagctttctacgaatgagcaacggggtccagccccagcacctcattcttca
attgatgcaatgcccactattaagattgcacaagcacatatccgcactgactcacactgt
ccagtctgtaaggataaatttgagttgggctctgaagcgaggaagatgccatgcagccat
atttatcattctgattgtattgttccttggttggttcagcacaactcatgccctgtttgc
cgccttgagctacctcctcaagggattgatagtgctcgtggtaggcgaagtagggtggga
gggaacagtgccagcagcagtagcagtaactatggtaacaactctgatggtttagagaat
tgtccacagaatcatggaaggaggactccatggtcgtatttgtggcctttccgctcttca
aattcgaacacccgccatcatgctgaaagtagaggaagcaattcctcagccactcatgaa
cagaataatgagatgagttactctggacgaccttttgaatattaa
DBGET
integrated database retrieval system
