Corylus avellana (European hazelnut): 132164641
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Entry
132164641 CDS
T09426
Name
(RefSeq) protein mago nashi homolog
KO
K12877
protein mago nashi
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03013
Nucleocytoplasmic transport
cave03015
mRNA surveillance pathway
cave03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132164641
09122 Translation
03013 Nucleocytoplasmic transport
132164641
03015 mRNA surveillance pathway
132164641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132164641
03041 Spliceosome [BR:
cave03041
]
132164641
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132164641
Spliceosome [BR:
cave03041
]
Complex C
Other components
EJC/TREX
132164641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
132164641
NCBI-ProteinID:
XP_059431167
LinkDB
All DBs
Position
ca10:3384178..3387536
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AA seq
153 aa
AA seq
DB search
MAGAETEEMEEFYVRYYVGHKGKFGHEFLEFEFRSNGMLRYANNSNYKNDTMIRKQVFVT
PAVLKECRRIILESEILKEDDNQWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSS
NDPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagcagagacagaggagatggaggagttctacgtgaggtactacgtggggcac
aaggggaagtttgggcacgagttcctggagttcgagttccgctccaacggcatgctccgc
tatgccaacaactccaactacaagaacgataccatgatccgcaagcaggtcttcgtcacc
cccgccgtcctcaaggagtgtcgccgcattatcctcgagagcgagatactgaaggaagat
gataaccaatggccggaacccgaccgtgttgggagacaggaacttgagattgtgatgggg
aatgagcatatctcttttactacttcaaagattggatcccttgttgatgtccagagcagt
aatgaccctgaagggcttcgcatattctattaccttgttcaggatctgaagtgcttcgta
ttctctctcatatctcttcatttcaagatcaagccaatatag
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